C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001AF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000156475-ENSG00000169302 CGP 9606 5:146581146-147387852
GeneTranscriptPositionBiotype
ENSG00000156475 (PPP2R2B)
protein phosphatase 2, regulatory subunit B, beta 		ENST00000336640 (PPP2R2B-003) 146589511-147055974 protein_coding
ENST00000394409 (PPP2R2B-002) 146581146-146878642 protein_coding
ENST00000394411 (PPP2R2B-017) 146589507-146878765 protein_coding
ENST00000394413 (PPP2R2B-201) 146588378-146856535 protein_coding
ENST00000394414 (PPP2R2B-001) 146589504-147056027 protein_coding
ENST00000453001 (PPP2R2B-202) 146589509-146878785 protein_coding
ENST00000502876 (PPP2R2B-007) 146698061-146922527 processed_transcript
ENST00000504198 (PPP2R2B-009) 146589511-147081491 protein_coding
ENST00000504565 (PPP2R2B-012) 146701072-147081293 nonsense_mediated_decay
ENST00000508267 (PPP2R2B-011) 146698078-147081470 protein_coding
ENST00000508545 (PPP2R2B-008) 146589504-146922576 protein_coding
ENST00000509721 (PPP2R2B-004) 146701086-147084784 processed_transcript
ENST00000512011 (PPP2R2B-006) 146698029-147055931 nonsense_mediated_decay
ENST00000512639 (PPP2R2B-010) 146589947-146878581 nonsense_mediated_decay
ENST00000512984 (PPP2R2B-013) 146590038-146600376 protein_coding
ENST00000515880 (PPP2R2B-005) 146698017-147055959 nonsense_mediated_decay
ENST00000520231 (PPP2R2B-014) 146751222-146922522 processed_transcript
ENST00000522831 (PPP2R2B-015) 146650547-147055931 nonsense_mediated_decay
ENST00000528601 (PPP2R2B-018) 146691214-146879170 nonsense_mediated_decay
ENST00000530902 (PPP2R2B-016) 146589504-146878894 processed_transcript
ENST00000532154 (PPP2R2B-019) 146698040-146878785 nonsense_mediated_decay
ENSG00000169302 (STK32A)
serine/threonine kinase 32A 		ENST00000306304 (STK32A-002) 147234963-147375916 retained_intron
ENST00000397936 (STK32A-003) 147234963-147387852 protein_coding
ENST00000398523 (STK32A-001) 147235125-147384678 protein_coding
ENST00000503384 (STK32A-005) 147342473-147351152 retained_intron
ENST00000503975 (STK32A-004) 147235055-147240159 retained_intron
ENST00000506091 (STK32A-007) 147383330-147384743 retained_intron
ENST00000510953 (STK32A-008) 147383349-147384446 retained_intron
ENST00000515832 (STK32A-006) 147382898-147383949 retained_intron
ENSG00000241291 (RN7SL791P)
RNA, 7SL, cytoplasmic 791, pseudogene 		ENST00000467868 (RN7SL791P-201) 146656401-146656695 misc_RNA
ENSG00000248568 (KRT8P48)
keratin 8 pseudogene 48 		ENST00000515599 (KRT8P48-001) 146706381-146707600 processed_pseudogene
ENSG00000249553 (PPP2R2B-IT1)
PPP2R2B intronic transcript 1 (non-protein coding) 		ENST00000505921 (PPP2R2B-IT1-001) 146914207-146919506 sense_intronic
ENSG00000250343 (CTC-255N20.1)
 ENST00000504297 (CTC-255N20.1-001) 147180204-147234859 antisense
ENSG00000250407 (CTB-99A3.1)
 ENST00000512730 (CTB-99A3.1-001) 146563226-146617004 antisense
ENSG00000265875 (AC011357.1)
 ENST00000578667 (AC011357.1-201) 146734835-146734904 miRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0001AF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024500-ENSMUSG00000039954 CGP 10090 18:42637432-43317481
GeneTranscriptPositionBiotype
ENSMUSG00000024500 (Ppp2r2b)
protein phosphatase 2, regulatory subunit B, beta 		ENSMUST00000025377 (Ppp2r2b-001) 42645269-43059471 protein_coding
ENSMUST00000117687 (Ppp2r2b-004) 42645269-42899294 protein_coding
ENSMUST00000120632 (Ppp2r2b-003) 42645294-42899643 protein_coding
ENSMUST00000136118 (Ppp2r2b-002) 42637432-42899503 processed_transcript
ENSMUST00000153737 (Ppp2r2b-006) 42737944-42938232 processed_transcript
ENSMUST00000155262 (Ppp2r2b-005) 42758468-42898815 processed_transcript
ENSMUSG00000039954 (Stk32a)
serine/threonine kinase 32A 		ENSMUST00000045477 (Stk32a-201) 43207697-43317481 protein_coding
ENSMUSG00000048188 (Gm8181)
predicted gene 8181 		ENSMUST00000062242 (Gm8181-201) 43171159-43171827 processed_pseudogene
ENSMUSG00000084959 (4933407I08Rik)
RIKEN cDNA 4933407I08 gene 		ENSMUST00000151215 (4933407I08Rik-001) 42935470-42938887 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001AF_0001ENSG00000156475ENST00000336640ENST00000394409ENST00000394411ENST00000394413ENST00000394414ENST00000453001ENST00000502876ENST00000504198ENST00000504565ENST00000508267ENST00000508545ENST00000509721ENST00000512011ENST00000512639ENST00000512984ENST00000515880ENST00000520231ENST00000522831ENST00000528601ENST00000530902ENST00000532154ENSG00000169302ENST00000306304ENST00000397936ENST00000398523ENST00000503384ENST00000503975ENST00000506091ENST00000510953ENST00000515832ENSG00000241291ENST00000467868ENSG00000248568ENST00000515599ENSG00000249553ENST00000505921ENSG00000250343ENST00000504297ENSG00000250407ENST00000512730ENSG00000265875ENST00000578667CIL_0001AF_0002ENSMUSG00000024500ENSMUST00000025377ENSMUST00000117687ENSMUST00000120632ENSMUST00000136118ENSMUST00000153737ENSMUST00000155262ENSMUSG00000039954ENSMUST00000045477ENSMUSG00000048188ENSMUST00000062242ENSMUSG00000084959ENSMUST00000151215
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001AF_0001ENSG00000156475ENST00000336640ENST00000394409ENST00000394411ENST00000394413ENST00000394414ENST00000453001ENST00000504198ENST00000504565ENST00000508545ENST00000512639ENST00000512984ENST00000530902ENST00000532154ENSG00000169302ENST00000306304ENST00000397936ENST00000398523ENST00000506091ENST00000515832ENSG00000241291ENST00000467868ENSG00000248568ENST00000515599ENSG00000249553ENST00000505921ENSG00000250343ENST00000504297ENSG00000250407ENST00000512730ENSG00000265875ENST00000578667CIL_0001AF_0002ENSMUSG00000024500ENSMUST00000025377ENSMUST00000117687ENSMUST00000120632ENSMUST00000136118ENSMUSG00000039954ENSMUST00000045477ENSMUSG00000048188ENSMUST00000062242ENSMUSG00000084959ENSMUST00000151215
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000156475 ENST00000336640 N/A N/A N/A N/A N/A 0.580±0.00 N/A N/A N/A 0.268±0.00 N/A 0.107±0.00 N/A N/A
ENST00000394409 N/A 0.064±0.00 N/A 3.786±1.25 0.082±0.00 N/A 0.014±0.00 N/A 0.052±0.00 0.020±0.01 0.008±0.00 0.031±0.03 N/A N/A
ENST00000394411 0.166±0.00 1.074±0.00 N/A 33.572±0.00 0.184±0.00 2.373±0.00 0.115±0.00 1.117±0.00 0.826±0.00 0.662±0.00 0.156±0.00 0.616±0.65 2.233±1.25 N/A
ENST00000394413 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.027±0.00 N/A N/A N/A
ENST00000394414 N/A N/A N/A 14.850±0.00 N/A 0.194±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453001 N/A N/A N/A N/A N/A N/A N/A N/A 0.048±0.00 N/A N/A N/A 0.471±0.18 N/A
ENST00000502876 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504198 N/A N/A N/A 6.517±0.00 N/A 0.722±0.00 0.103±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000504565 N/A N/A 1.345±0.00 N/A N/A N/A N/A N/A 1.494±1.39 N/A N/A N/A N/A N/A
ENST00000508267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508545 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.590±1.07
ENST00000509721 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512011 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512639 0.125±0.00 0.304±0.00 N/A N/A 0.194±0.00 N/A N/A N/A N/A 0.499±0.00 N/A N/A N/A 4.140±0.81
ENST00000512984 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.344±0.00 N/A N/A N/A
ENST00000515880 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520231 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530902 N/A N/A N/A N/A N/A N/A N/A 0.780±0.00 N/A N/A N/A 0.293±0.00 N/A N/A
ENST00000532154 N/A N/A N/A N/A 0.614±0.00 0.573±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000169302 ENST00000306304 0.045±0.00 N/A N/A 0.234±0.00 N/A N/A 0.070±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000397936 N/A 0.148±0.00 0.235±0.00 0.360±0.07 0.077±0.00 0.813±0.00 0.071±0.00 0.613±0.00 0.013±0.00 0.081±0.02 N/A N/A 0.028±0.00 0.075±0.00
ENST00000398523 N/A N/A 0.474±0.00 N/A 0.421±0.00 N/A N/A N/A N/A N/A 0.072±0.00 0.138±0.00 N/A N/A
ENST00000503384 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506091 0.048±0.00 N/A N/A N/A N/A 0.488±0.00 N/A N/A 0.568±0.00 0.418±0.00 N/A 0.051±0.00 0.073±0.00 N/A
ENST00000510953 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515832 N/A N/A 1.514±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000241291 ENST00000467868 N/A N/A N/A 0.324±0.25 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000248568 ENST00000515599 N/A N/A 0.040±0.00 0.327±0.29 N/A 0.084±0.07 0.033±0.00 0.058±0.00 0.436±0.00 0.141±0.12 N/A 0.323±0.42 0.205±0.16 0.549±0.00
ENSG00000249553 ENST00000505921 N/A N/A N/A 0.148±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.201±0.02
ENSG00000250343 ENST00000504297 0.257±0.00 0.031±0.00 N/A 0.032±0.00 N/A 0.171±0.00 N/A 0.046±0.00 0.079±0.00 N/A N/A 0.200±0.06 N/A 0.078±0.02
ENSG00000250407 ENST00000512730 0.054±0.00 0.110±0.00 N/A 0.037±0.02 0.236±0.00 0.118±0.00 0.087±0.00 N/A N/A N/A 0.131±0.00 N/A 0.124±0.07 0.066±0.00
ENSG00000265875 ENST00000578667 N/A N/A N/A 0.396±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024500 ENSMUST00000025377 N/A N/A N/A 6.949±0.00 N/A N/A N/A N/A 0.041±0.02 N/A N/A N/A 0.079±0.01 14.170±0.00
ENSMUST00000117687 2.177±2.24 N/A 2.023±0.45 27.839±5.94 0.341±0.17 0.225±0.00 0.124±0.08 0.813±0.24 0.132±0.07 0.679±0.35 0.136±0.00 3.213±1.14 0.208±0.07 N/A
ENSMUST00000120632 N/A N/A N/A N/A 0.619±0.00 N/A 0.047±0.00 N/A 0.098±0.00 N/A 0.069±0.04 N/A 0.036±0.00 7.126±0.00
ENSMUST00000136118 1.699±1.61 3.986±0.43 N/A N/A 1.095±0.32 0.742±0.28 0.082±0.03 0.733±0.30 0.041±0.03 1.269±0.19 N/A 9.546±1.43 0.034±0.00 N/A
ENSMUST00000153737 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155262 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039954 ENSMUST00000045477 0.061±0.05 1.176±0.41 0.133±0.09 1.076±0.00 0.189±0.06 0.578±0.11 0.170±0.06 1.145±0.36 0.156±0.11 0.675±0.08 0.040±0.02 0.708±0.36 0.038±0.01 0.295±0.10
ENSMUSG00000048188 ENSMUST00000062242 0.641±0.33 0.592±0.22 0.221±0.00 0.157±0.03 0.562±0.24 0.358±0.14 0.212±0.12 0.576±0.21 0.213±0.09 0.197±0.10 0.085±0.00 1.004±0.66 0.126±0.10 1.271±0.22
ENSMUSG00000084959 ENSMUST00000151215 N/A N/A N/A N/A N/A N/A 0.024±0.00 N/A N/A N/A N/A N/A N/A 7.620±1.29

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