C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: R3H domain containing 2 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000505381 R3HDM2P1-001 ENSG00000248735 9606 + 4:133124104-133126063 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLungTestisENST00000505381
Transcript ID Brain Heart Lung Testis
ENST00000505381 0.182±0.00 0.098±0.00 0.053±0.00 0.049±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00001L CIL_00001L_0001 CGP 4:129093317-133208606

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000169888 R3hdm2-004 protein_coding Mus_musculus 0 414
ENSMUST00000105249 R3hdm2-006 protein_coding Mus_musculus 0 414
ENSMUST00000164161 R3hdm2-008 nonsense_mediated_decay Mus_musculus 0 414
ENSMUST00000164831 R3hdm2-002 protein_coding Mus_musculus 0 414
ENSMUST00000064793 R3hdm2-003 protein_coding Mus_musculus 0 244
ENSMUST00000105250 R3hdm2-202 protein_coding Mus_musculus 0 243
ENSMUST00000077046 R3hdm2-201 protein_coding Mus_musculus 0 243
ENSMUST00000105251 R3hdm2-005 protein_coding Mus_musculus 0 243
ENSMUST00000170336 R3hdm2-007 protein_coding Mus_musculus 0 243
ENSMUST00000166820 R3hdm2-001 protein_coding Mus_musculus 0 243
ENSMUST00000164469 R3hdm2-014 retained_intron Mus_musculus 6e-28 130

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