C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | collagen, type XXV, alpha 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000505591  |
COL25A1-005 |
ENSG00000188517 |
9606 | - |
4:109301809-109302657  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000872 | CIL_000872_0001 | VISTA | 4:108310752-108912309 |
| CIL_0008PU | CIL_0008PU_0001 | VISTA | 4:108672054-109274138 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000106353
|
Col25a1-001 | protein_coding | Mus_musculus | 1.99993e-41 | 172 |
|
ENSMUST00000183368
|
Col25a1-004 | nonsense_mediated_decay | Mus_musculus | 1.99993e-41 | 172 |
|
ENSMUST00000080335
|
Col25a1-002 | protein_coding | Mus_musculus | 1.99993e-41 | 172 |
|
ENSMUST00000143830
|
Col25a1-003 | retained_intron | Mus_musculus | 1.99993e-41 | 172 |
