C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear transcription factor, X-box binding-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000507131 NFXL1-004 ENSG00000170448 9606 - 4:47848304-47914616 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonLiverMuscleOvaryTestisENST00000507131
Transcript ID Bladder Breast Colon Liver Muscle Ovary Testis
ENST00000507131 1.172±0.00 0.932±0.00 0.522±0.00 0.514±0.00 0.703±0.00 1.587±0.00 3.687±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RD CIL_0008RD_0001 VISTA 4:47524449-48126035
CIL_0001MZ CIL_0001MZ_0001 CGP 4:47593998-47914667

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087216 Nfxl1-001 protein_coding Mus_musculus 0 3107
ENSMUST00000135318 Nfxl1-002 nonsense_mediated_decay Mus_musculus 0 1676
ENSMUST00000074948 Nfxl1-004 protein_coding Mus_musculus 0 1066
ENSMUST00000146761 Nfxl1-003 retained_intron Mus_musculus 0 558
ENSMUST00000134452 Nfxl1-005 retained_intron Mus_musculus 0 551
ENSMUST00000153882 Nfxl1-007 retained_intron Mus_musculus 0 477

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