C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: heparanase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000507150 HPSE-004 ENSG00000173083 9606 - 4:83295320-83335153 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastENST00000507150
Transcript ID Breast
ENST00000507150 0.384±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00069P CIL_00069P_0001 CGP 4:83261536-83335153
CIL_0006JB CIL_0006JB_0001 CGP 4:83292461-83455856

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0008152 IEA metabolic process
GO:0016020 IEA membrane
GO:0016798 IEA hydrolase activity, acting on glycosyl bonds
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000045617 Hpse-001 protein_coding Mus_musculus 0 680
ENSMUST00000112908 Hpse-002 protein_coding Mus_musculus 0 531

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