C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006JB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000173083-ENSG00000163312 CGP 9606 4:83292461-83455856
GeneTranscriptPositionBiotype
ENSG00000163312 (HELQ)
helicase, POLQ-like 		ENST00000295488 (HELQ-001) 83407343-83455856 protein_coding
ENST00000440639 (HELQ-007) 83453757-83455823 processed_transcript
ENST00000508591 (HELQ-003) 83407343-83455804 nonsense_mediated_decay
ENST00000510985 (HELQ-002) 83407373-83455823 protein_coding
ENST00000512539 (HELQ-004) 83407367-83427726 processed_transcript
ENST00000515482 (HELQ-006) 83453720-83455855 processed_transcript
ENSG00000173083 (HPSE)
heparanase 		ENST00000311412 (HPSE-002) 83292461-83334882 protein_coding
ENST00000405413 (HPSE-001) 83292461-83335153 protein_coding
ENST00000507150 (HPSE-004) 83295320-83335153 nonsense_mediated_decay
ENST00000508891 (HPSE-007) 83295320-83335153 nonsense_mediated_decay
ENST00000509906 (HPSE-006) 83295320-83335153 nonsense_mediated_decay
ENST00000512196 (HPSE-005) 83295320-83335153 protein_coding
ENST00000513463 (HPSE-003) 83295344-83334782 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0006JB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035273-ENSMUSG00000035266 CGP 10090 5:100679484-100798598
GeneTranscriptPositionBiotype
ENSMUSG00000035266 (Helq)
helicase, POLQ-like 		ENSMUST00000044684 (Helq-001) 100762145-100798598 protein_coding
ENSMUST00000133845 (Helq-003) 100762447-100798468 protein_coding
ENSMUST00000135102 (Helq-007) 100771548-100774120 retained_intron
ENSMUST00000138417 (Helq-009) 100762456-100766813 retained_intron
ENSMUST00000139203 (Helq-010) 100762151-100765438 retained_intron
ENSMUST00000144948 (Helq-005) 100791772-100793052 retained_intron
ENSMUST00000151201 (Helq-002) 100783180-100798577 nonsense_mediated_decay
ENSMUST00000152554 (Helq-006) 100778385-100783000 retained_intron
ENSMUST00000155362 (Helq-008) 100766737-100774036 nonsense_mediated_decay
ENSMUSG00000035273 (Hpse)
heparanase 		ENSMUST00000045617 (Hpse-001) 100679484-100719716 protein_coding
ENSMUST00000112908 (Hpse-002) 100684581-100719705 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006JB_0001ENSG00000163312ENST00000295488ENST00000440639ENST00000508591ENST00000510985ENST00000512539ENST00000515482ENSG00000173083ENST00000311412ENST00000405413ENST00000507150ENST00000508891ENST00000509906ENST00000512196ENST00000513463CIL_0006JB_0002ENSMUSG00000035266ENSMUST00000044684ENSMUST00000133845ENSMUST00000135102ENSMUST00000138417ENSMUST00000139203ENSMUST00000144948ENSMUST00000151201ENSMUST00000152554ENSMUST00000155362ENSMUSG00000035273ENSMUST00000045617ENSMUST00000112908
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006JB_0001ENSG00000163312ENST00000295488ENST00000440639ENST00000508591ENST00000510985ENST00000515482ENSG00000173083ENST00000311412ENST00000405413ENST00000507150ENST00000508891ENST00000509906ENST00000512196ENST00000513463CIL_0006JB_0002ENSMUSG00000035266ENSMUST00000044684ENSMUST00000133845ENSMUST00000135102ENSMUST00000138417ENSMUST00000139203ENSMUST00000151201ENSMUST00000155362ENSMUSG00000035273ENSMUST00000045617ENSMUST00000112908
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163312 ENST00000295488 0.260±0.00 N/A N/A 0.208±0.00 0.183±0.00 0.736±0.00 0.760±0.00 N/A N/A N/A 0.992±0.00 1.140±0.06 0.957±0.00 3.927±0.00
ENST00000440639 N/A N/A N/A N/A N/A 2.247±0.00 N/A N/A N/A 1.460±0.00 N/A 4.101±0.00 2.162±1.09 N/A
ENST00000508591 0.503±0.00 0.936±0.00 0.390±0.00 N/A 0.512±0.00 N/A 0.548±0.00 0.701±0.49 0.151±0.00 0.348±0.03 N/A 0.994±0.00 0.398±0.11 2.320±0.00
ENST00000510985 N/A 1.324±0.00 0.364±0.00 0.733±0.00 0.936±0.02 N/A 0.429±0.05 0.408±0.00 0.435±0.00 0.876±0.00 N/A 1.213±1.01 0.616±0.00 1.228±0.00
ENST00000512539 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515482 N/A N/A N/A N/A 2.021±0.00 N/A N/A 2.407±0.00 N/A N/A 2.985±0.24 N/A N/A N/A
ENSG00000173083 ENST00000311412 0.283±0.00 N/A 0.447±0.00 0.261±0.12 0.228±0.03 0.388±0.15 0.025±0.00 1.074±0.00 0.260±0.14 0.582±0.11 N/A 1.683±0.21 0.963±0.12 0.431±0.00
ENST00000405413 N/A N/A 0.062±0.00 0.132±0.00 0.237±0.00 0.093±0.00 N/A N/A 0.098±0.00 N/A N/A 0.861±0.00 0.771±0.00 N/A
ENST00000507150 N/A N/A N/A N/A 0.384±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508891 N/A 0.798±0.00 N/A N/A N/A 0.406±0.00 N/A N/A N/A N/A N/A N/A 0.921±0.00 N/A
ENST00000509906 0.635±0.00 N/A N/A 0.317±0.00 N/A N/A 0.232±0.00 N/A 0.208±0.00 0.569±0.00 N/A 0.814±0.00 0.363±0.00 N/A
ENST00000512196 N/A N/A N/A N/A N/A N/A N/A 0.831±0.00 0.175±0.00 0.406±0.00 N/A N/A 0.785±0.00 N/A
ENST00000513463 0.801±0.00 N/A N/A N/A 0.205±0.00 N/A N/A N/A 0.100±0.00 1.282±0.00 N/A 0.450±0.00 0.653±0.00 1.534±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035266 ENSMUST00000044684 0.952±0.08 0.456±0.06 1.527±0.06 2.554±1.06 0.665±0.17 0.856±0.11 0.381±0.11 0.915±0.23 2.270±1.94 0.596±0.14 0.430±0.11 1.018±0.34 2.384±1.12 0.973±0.45
ENSMUST00000133845 N/A N/A N/A 0.433±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135102 N/A N/A N/A 4.120±0.00 N/A N/A N/A N/A N/A N/A N/A 5.381±0.00 5.126±3.38 1.689±0.00
ENSMUST00000138417 N/A N/A N/A 4.958±0.00 N/A N/A N/A 2.952±0.45 1.150±0.00 N/A N/A N/A N/A 2.830±0.00
ENSMUST00000139203 N/A N/A 1.504±0.00 N/A N/A N/A 0.417±0.00 1.090±0.00 0.676±0.46 N/A 0.610±0.00 N/A N/A N/A
ENSMUST00000144948 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151201 N/A 1.064±0.40 N/A 1.303±0.00 1.265±0.02 1.477±0.49 N/A 0.658±0.00 0.352±0.18 N/A N/A 2.133±0.31 2.712±1.73 N/A
ENSMUST00000152554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155362 N/A 1.172±0.14 N/A N/A N/A 1.368±0.00 N/A N/A 0.272±0.00 N/A N/A 1.545±0.00 N/A N/A
ENSMUSG00000035273 ENSMUST00000045617 2.091±0.42 0.276±0.13 4.745±0.19 0.155±0.06 3.537±0.87 4.436±0.98 0.491±0.16 0.415±0.24 1.249±0.41 1.555±0.58 0.205±0.13 0.716±0.34 2.421±1.17 1.256±0.53
ENSMUST00000112908 0.862±0.15 0.555±0.37 N/A 0.110±0.00 5.706±4.22 7.238±1.15 N/A 0.152±0.00 0.274±0.08 2.352±0.04 N/A 1.886±0.66 N/A 0.113±0.00

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