C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000509173 RP11-47F1.1-001 ENSG00000250441 9606 - 5:108894347-108894628 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastLiverOvaryENST00000509173
Transcript ID Adrenal Breast Liver Ovary
ENST00000509173 0.110±0.00 0.163±0.00 0.863±0.00 3.776±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00075K CIL_00075K_0001 CGP 5:108747822-109409994

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000172777 Lsm2-004 processed_transcript Mus_musculus 0 327
ENSMUST00000007266 Lsm2-003 protein_coding Mus_musculus 0 327
ENSMUST00000174326 Lsm2-008 processed_transcript Mus_musculus 0 327
ENSMUST00000114011 Lsm2-001 protein_coding Mus_musculus 0 327
ENSMUST00000172890 Lsm2-007 processed_transcript Mus_musculus 0 305
ENSMUST00000174860 Lsm2-005 retained_intron Mus_musculus 0 270

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