C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: NOP16 nucleolar protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000509257 NOP16-009 ENSG00000048162 9606 - 5:176384643-176388568 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002DL CIL_0002DL_0001 CGP 5:176346061-176401865
CIL_00098R CIL_00098R_0001 VISTA 5:176349731-176951529
CIL_0000P0 CIL_0000P0_0002 CGP 5:176365468-176401865
CIL_0002N9 CIL_0002N9_0001 CGP 5:176383938-176389771

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000148222 Nop16-003 protein_coding Mus_musculus 0 494
ENSMUST00000026987 Nop16-001 protein_coding Mus_musculus 0 494
ENSMUST00000149462 Nop16-002 nonsense_mediated_decay Mus_musculus 4e-32 143

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