C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000P0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000060775-ENSDARG00000044402 CGP 7955 21:35892447-35941233
GeneTranscriptPositionBiotype
ENSDARG00000044402 (nop16)
NOP16 nucleolar protein homolog (yeast) 		ENSDART00000065208 (nop16-001) 35934011-35941233 protein_coding
ENSDARG00000060775 (arl10)
ADP-ribosylation factor-like 10 		ENSDART00000086001 (arl10-001) 35903078-35920071 protein_coding
ENSDART00000139500 (arl10-002) 35892448-35919653 protein_coding
ENSDART00000140027 (arl10-004) 35903128-35913799 retained_intron
ENSDART00000141244 (arl10-003) 35892447-35906515 processed_transcript
ENSDARG00000076041 (WWC1)
WW and C2 domain containing 1 		ENSDART00000113678 (WWC1-201) 35787511-35892472 protein_coding
ENSDART00000138129 (WWC1-001) 35787422-35892472 protein_coding
CIL_0000P0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000175414-ENSG00000175414 CGP 9606 5:176365468-176401865
GeneTranscriptPositionBiotype
ENSG00000146066 (HIGD2A)
HIG1 hypoxia inducible domain family, member 2A 		ENST00000274787 (HIGD2A-001) 176388747-176389771 protein_coding
ENSG00000175414 (ARL10)
ADP-ribosylation factor-like 10 		ENST00000310389 (ARL10-001) 176365468-176381909 protein_coding
ENST00000503175 (ARL10-003) 176368947-176388638 protein_coding
ENST00000507151 (ARL10-004) 176366538-176369127 retained_intron
ENST00000514533 (ARL10-002) 176368850-176401865 protein_coding
ENSG00000175416 (CLTB)
clathrin, light chain B 		ENST00000310418 (CLTB-001) 176392455-176416569 protein_coding
ENST00000345807 (CLTB-002) 176392455-176416569 protein_coding
ENST00000502877 (CLTB-005) 176392793-176416538 protein_coding
ENST00000507821 (CLTB-007) 176405590-176406340 processed_transcript
ENST00000508425 (CLTB-006) 176392642-176416261 protein_coding
ENST00000509319 (CLTB-004) 176406167-176407591 processed_transcript
ENST00000510734 (CLTB-003) 176392649-176416539 nonsense_mediated_decay
CIL_0000P0_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025870-ENSMUSG00000025869 CGP 10090 13:54575015-54590090
GeneTranscriptPositionBiotype
ENSMUSG00000025869 (Nop16)
NOP16 nucleolar protein 		ENSMUST00000026987 (Nop16-001) 54584185-54590090 protein_coding
ENSMUST00000148222 (Nop16-003) 54584536-54590058 protein_coding
ENSMUST00000149462 (Nop16-002) 54585239-54589976 nonsense_mediated_decay
ENSMUSG00000025870 (Arl10)
ADP-ribosylation factor-like 10 		ENSMUST00000026988 (Arl10-001) 54575015-54581128 protein_coding
ENSMUST00000135354 (Arl10-004) 54578381-54578909 processed_transcript
ENSMUST00000142246 (Arl10-003) 54578812-54579537 protein_coding
ENSMUST00000156024 (Arl10-002) 54575047-54579016 protein_coding
ENSMUSG00000080454 (Gm24195)
predicted gene, 24195 		ENSMUST00000116804 (Gm24195-201) 54578133-54578240 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000P0_0001ENSDARG00000044402ENSDART00000065208ENSDARG00000060775ENSDART00000086001ENSDART00000139500ENSDART00000140027ENSDART00000141244ENSDARG00000076041ENSDART00000113678ENSDART00000138129CIL_0000P0_0002ENSG00000146066ENST00000274787ENSG00000175414ENST00000310389ENST00000503175ENST00000507151ENST00000514533ENSG00000175416ENST00000310418ENST00000345807ENST00000502877ENST00000507821ENST00000508425ENST00000509319ENST00000510734CIL_0000P0_0003ENSMUSG00000025869ENSMUST00000026987ENSMUST00000148222ENSMUST00000149462ENSMUSG00000025870ENSMUST00000026988ENSMUST00000135354ENSMUST00000142246ENSMUST00000156024ENSMUSG00000080454ENSMUST00000116804
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000P0_0001ENSDARG00000044402ENSDART00000065208ENSDARG00000060775ENSDART00000086001ENSDARG00000076041ENSDART00000113678CIL_0000P0_0002ENSG00000146066ENST00000274787ENSG00000175414ENST00000310389ENSG00000175416ENST00000310418ENST00000345807ENST00000502877ENST00000508425ENST00000510734CIL_0000P0_0003ENSMUSG00000025869ENSMUST00000026987ENSMUST00000148222ENSMUST00000149462ENSMUSG00000025870ENSMUST00000026988ENSMUST00000135354ENSMUST00000142246ENSMUST00000156024ENSMUSG00000080454ENSMUST00000116804
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000044402 ENSDART00000065208 N/A N/A N/A 7.361±1.63 N/A N/A 7.927±5.96 10.121±8.40 7.228±0.00 N/A 4.367±0.00 N/A N/A N/A
ENSDARG00000060775 ENSDART00000086001 N/A N/A N/A 6.874±0.00 N/A N/A 1.346±0.00 N/A N/A N/A 0.650±0.00 N/A N/A N/A
ENSDART00000139500 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000140027 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141244 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000076041 ENSDART00000113678 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.206±0.00 N/A N/A N/A
ENSDART00000138129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000146066 ENST00000274787 57.805±0.00 97.336±0.00 2.127±0.00 33.375±0.00 50.959±45.16 46.740±41.80 59.272±55.18 37.086±32.25 56.910±0.00 39.139±34.43 82.781±73.88 101.657±48.18 96.429±44.67 45.482±20.10
ENSG00000175414 ENST00000310389 0.849±0.00 1.653±0.00 0.095±0.00 1.504±0.28 0.803±0.11 0.661±0.34 0.519±0.42 0.619±0.29 0.347±0.00 0.693±0.08 0.626±0.36 1.606±0.43 0.613±0.00 0.995±0.44
ENST00000503175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514533 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000175416 ENST00000310418 N/A N/A N/A 49.450±25.66 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000345807 52.639±0.00 72.603±0.00 2.663±0.00 14.865±11.67 36.188±30.62 44.718±31.94 56.665±46.61 33.896±29.10 21.566±12.88 38.609±33.09 52.941±30.01 89.588±56.34 228.848±48.60 60.249±1.88
ENST00000502877 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 22.114±0.00 1.795±0.00 N/A N/A
ENST00000507821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508425 31.218±0.00 37.379±0.00 N/A 43.255±0.00 39.034±0.00 47.879±0.00 N/A 26.690±0.00 12.362±0.00 34.338±0.00 47.792±0.00 N/A N/A 29.412±0.00
ENST00000509319 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510734 N/A N/A 0.642±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025869 ENSMUST00000026987 5.583±1.36 2.221±0.50 9.840±0.92 3.875±0.00 3.676±0.88 2.762±0.39 2.522±0.17 5.197±1.24 9.058±6.92 2.828±0.50 6.400±1.03 5.092±2.80 12.535±5.17 1.009±0.00
ENSMUST00000148222 2.946±0.76 1.927±0.45 5.208±1.08 10.066±0.00 1.544±0.00 3.285±1.46 1.661±0.13 5.039±1.16 6.045±3.25 2.386±0.76 4.082±0.67 6.662±3.71 14.049±8.53 6.323±0.00
ENSMUST00000149462 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.311±3.78 14.744±8.21 N/A
ENSMUSG00000025870 ENSMUST00000026988 6.635±0.00 21.767±9.55 13.300±0.00 37.431±0.00 6.442±1.28 9.480±1.36 2.821±0.73 9.229±0.79 2.631±1.93 9.623±0.00 1.212±0.28 11.271±2.89 N/A 0.340±0.17
ENSMUST00000135354 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.104±0.00
ENSMUST00000142246 N/A N/A 4.572±0.00 N/A N/A N/A N/A N/A 1.818±0.03 N/A 1.612±0.00 N/A N/A N/A
ENSMUST00000156024 N/A 21.236±0.73 7.076±0.00 N/A N/A N/A N/A N/A 2.039±0.00 12.199±0.00 N/A 9.697±0.00 N/A 0.788±0.29
ENSMUSG00000080454 ENSMUST00000116804 N/A N/A N/A N/A N/A N/A N/A 2911.655±1163.72 N/A N/A 13.647±0.00 121.287±0.00 56.136±28.52 86.649±0.00

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