C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: poly(rC) binding protein 2 pseudogene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000509726 PCBP2P3-001 ENSG00000248826 9606 - 5:91843687-91844529 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonTestisENST00000509726
Transcript ID Adipose Breast Colon Testis
ENST00000509726 0.016±0.00 0.016±0.00 0.015±0.00 0.016±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SQ CIL_0008SQ_0001 VISTA 5:91332795-91933409
CIL_0008UY CIL_0008UY_0001 VISTA 5:91441071-92043082
CIL_000905 CIL_000905_0001 VISTA 5:91598707-92199545
CIL_0007N1 CIL_0007N1_0001 UCNEbase 5:91607654-92340311
CIL_0008JU CIL_0008JU_0001 VISTA 5:91675959-92277069
CIL_0007QW CIL_0007QW_0001 VISTA 5:91702367-92303176
CIL_00081K CIL_00081K_0001 VISTA 5:91703430-92304348
CIL_0008OR CIL_0008OR_0001 VISTA 5:91722806-92323913

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000078404 Pcbp2-202 protein_coding Mus_musculus 0 446
ENSMUST00000108838 Pcbp2-203 protein_coding Mus_musculus 0 344
ENSMUST00000077037 Pcbp2-201 protein_coding Mus_musculus 0 344

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