C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ras-related C3 botulinum toxin substrate 1 pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000511164 RAC1P2-001 ENSG00000249936 9606 - 4:46723830-46724408 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000511164
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000511164 0.079±0.00 0.054±0.00 0.339±0.11 0.055±0.00 0.298±0.25 0.074±0.00 0.201±0.15 0.074±0.00 0.117±0.00 0.544±0.48 0.054±0.00 0.118±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002YU CIL_0002YU_0001 CGP 4:46248427-46909235

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000080537 Rac1-001 protein_coding Mus_musculus 0 782
ENSMUST00000145709 Rac1-003 processed_transcript Mus_musculus 0 610
ENSMUST00000100489 Rac1-002 protein_coding Mus_musculus 0 472
ENSMUST00000131513 Rac1-004 processed_transcript Mus_musculus 0 254
ENSMUST00000043382 4930544G11Rik-201 protein_coding Mus_musculus 0.000000005 66

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