C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 4930544G11 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000043382 4930544G11Rik-201 ENSMUSG00000036463 10090 + 6:65952571-65954012 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartKidneyOvaryTestisENSMUST00000043382
Transcript ID Breast Heart Kidney Ovary Testis
ENSMUST00000043382 0.121±0.00 0.024±0.00 0.076±0.00 0.025±0.00 99.801±27.30

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005525 IEA GTP binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0005925 IEA focal adhesion
GO:0005938 IEA cell cortex
GO:0007264 IEA small GTPase mediated signal transduction
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0017022 IEA myosin binding
GO:0021762 IEA substantia nigra development
GO:0030334 IEA regulation of cell migration
GO:0032467 IEA positive regulation of cytokinesis
GO:0036089 IEA cleavage furrow formation
GO:0038027 IEA apolipoprotein A-I-mediated signaling pathway
GO:0043123 IEA positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043296 IEA apical junction complex
GO:0043297 IEA apical junction assembly
GO:0045666 IEA positive regulation of neuron differentiation
GO:0050919 IEA negative chemotaxis
GO:0051496 IEA positive regulation of stress fiber assembly
GO:0070062 IEA extracellular vesicular exosome
GO:0090307 IEA spindle assembly involved in mitosis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000348035 RAC1-001 protein_coding Homo_sapiens 0.00000002 66
ENST00000356142 RAC1-002 protein_coding Homo_sapiens 0.000000007 66
ENST00000406314 RP11-40G16.1-001 processed_pseudogene Homo_sapiens 0 307
ENST00000418115 RHOA-001 protein_coding Homo_sapiens 0 675
ENST00000422781 RHOA-003 protein_coding Homo_sapiens 0 444
ENST00000431929 RHOA-006 protein_coding Homo_sapiens 0 211
ENST00000445425 RHOA-005 protein_coding Homo_sapiens 0 440
ENST00000454011 RHOA-004 protein_coding Homo_sapiens 0 370
ENST00000488373 RAC1-004 processed_transcript Homo_sapiens 0.000000007 66
ENST00000497741 RAC1-003 processed_transcript Homo_sapiens 0.000000005 66
ENST00000511164 RAC1P2-001 processed_pseudogene Homo_sapiens 0.000000005 66

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