C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | GTF2H2 family member C | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000511629  |
GTF2H2C-005 |
ENSG00000183474 |
9606 | + |
5:69560223-69570011  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005K7 | CIL_0005K7_0002 | CGP | 5:69492292-69594723 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000439 | IEA | core TFIIH complex |
| GO:0006289 | IEA | nucleotide-excision repair |
| GO:0006351 | IEA | transcription, DNA-templated |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000134842
|
Gtf2h2-002 | nonsense_mediated_decay | Mus_musculus | 0 | 278 |
|
ENSMUST00000066940
|
Gtf2h2-006 | protein_coding | Mus_musculus | 0 | 276 |
|
ENSMUST00000066984
|
Gtf2h2-001 | protein_coding | Mus_musculus | 0 | 276 |
|
ENSMUST00000145266
|
Gtf2h2-003 | nonsense_mediated_decay | Mus_musculus | 0 | 276 |
|
ENSMUST00000152049
|
Gtf2h2-007 | processed_transcript | Mus_musculus | 0 | 195 |
|
ENSMUST00000147229
|
Gtf2h2-005 | retained_intron | Mus_musculus | 0 | 195 |
|
ENSMUST00000142182
|
Gtf2h2-004 | retained_intron | Mus_musculus | 0 | 195 |
|
ENSMUST00000048099
|
Tmem194-001 | protein_coding | Mus_musculus | 0.000003 | 58 |
