C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: general transcription factor II H, polypeptide 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000145266 Gtf2h2-003 ENSMUSG00000021639 10090 - 13:100460218-100492338 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonKidneyLiverLungOvaryPlacentaENSMUST00000145266
Transcript ID Adipose Brain Breast Colon Kidney Liver Lung Ovary Placenta
ENSMUST00000145266 1.585±0.00 2.004±0.00 2.599±1.90 1.047±0.00 2.209±0.00 2.698±0.00 1.173±0.00 2.336±0.98 2.710±0.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004ZF CIL_0004ZF_0002 CGP 13:100407770-100492579

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000439 IEA core TFIIH complex
GO:0006289 IEA nucleotide-excision repair
GO:0006351 IEA transcription, DNA-templated
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000274400 GTF2H2-001 protein_coding Homo_sapiens 0 1565
ENST00000330280 GTF2H2-003 protein_coding Homo_sapiens 0 1565
ENST00000380729 GTF2H2C-004 protein_coding Homo_sapiens 0 1565
ENST00000425596 GTF2H2-201 protein_coding Homo_sapiens 0 1323
ENST00000446221 GTF2H2C-006 nonsense_mediated_decay Homo_sapiens 0 1317
ENST00000502599 GTF2H2C-016 retained_intron Homo_sapiens 0 193
ENST00000502619 GTF2H2C-003 retained_intron Homo_sapiens 0 782
ENST00000503604 GTF2H2C-008 retained_intron Homo_sapiens 0 595
ENST00000504712 GTF2H2B-004 processed_transcript Homo_sapiens 0 276
ENST00000506129 GTF2H2C-011 nonsense_mediated_decay Homo_sapiens 0 579
ENST00000507549 GTF2H2B-002 processed_transcript Homo_sapiens 0 667
ENST00000507595 GTF2H2C-013 protein_coding Homo_sapiens 0 645
ENST00000508065 GTF2H2B-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 1570
ENST00000508325 GTF2H2C-010 retained_intron Homo_sapiens 0 361
ENST00000508592 GTF2H2-020 retained_intron Homo_sapiens 0 193
ENST00000510979 GTF2H2C-001 protein_coding Homo_sapiens 0 1565
ENST00000511629 GTF2H2C-005 nonsense_mediated_decay Homo_sapiens 0 276
ENST00000512736 GTF2H2C-007 protein_coding Homo_sapiens 0 669
ENST00000513202 GTF2H2B-003 processed_transcript Homo_sapiens 0 1323
ENST00000514069 GTF2H2C-012 nonsense_mediated_decay Homo_sapiens 0 291
ENST00000514162 GTF2H2C-014 protein_coding Homo_sapiens 0 525
ENST00000517900 GTF2H2-016 protein_coding Homo_sapiens 0 525
ENST00000518898 GTF2H2-004 nonsense_mediated_decay Homo_sapiens 0 896
ENST00000519783 GTF2H2-002 nonsense_mediated_decay Homo_sapiens 0 1317
ENST00000521858 GTF2H2-011 retained_intron Homo_sapiens 0 276
ENST00000521942 GTF2H2-008 retained_intron Homo_sapiens 0 902
ENST00000522654 GTF2H2-009 retained_intron Homo_sapiens 0 782
ENST00000523003 GTF2H2-010 retained_intron Homo_sapiens 0 669
ENST00000523693 GTF2H2-024 retained_intron Homo_sapiens 0 361
ENST00000610491 GTF2H2C_2-002 retained_intron Homo_sapiens 0 776
ENST00000611072 GTF2H2-020 retained_intron Homo_sapiens 0 193
ENST00000611753 GTF2H2-008 retained_intron Homo_sapiens 0 902
ENST00000612211 GTF2H2C_2-007 protein_coding Homo_sapiens 0 669
ENST00000612324 GTF2H2C_2-005 nonsense_mediated_decay Homo_sapiens 0 276
ENST00000612581 GTF2H2-202 protein_coding Homo_sapiens 0 1570
ENST00000612808 GTF2H2-009 retained_intron Homo_sapiens 0 782
ENST00000616295 GTF2H2C_2-003 retained_intron Homo_sapiens 0 850
ENST00000616846 GTF2H2-002 nonsense_mediated_decay Homo_sapiens 0 1323
ENST00000617228 GTF2H2-001 protein_coding Homo_sapiens 0 1570
ENST00000619345 GTF2H2-011 retained_intron Homo_sapiens 0 276
ENST00000619699 GTF2H2C_2-004 protein_coding Homo_sapiens 0 1559
ENST00000619880 GTF2H2C_2-006 nonsense_mediated_decay Homo_sapiens 0 1312
ENST00000619997 GTF2H2-018 protein_coding Homo_sapiens 0 1570
ENST00000620205 GTF2H2-024 retained_intron Homo_sapiens 0 361
ENST00000621406 GTF2H2C_2-001 protein_coding Homo_sapiens 0 1559
ENST00000621491 GTF2H2-016 protein_coding Homo_sapiens 0 525
ENST00000622222 GTF2H2-010 retained_intron Homo_sapiens 0 669

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