C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cadherin 9, type 2 (T1-cadherin)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000513289 CDH9-005 ENSG00000113100 9606 - 5:26915755-27121150 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastENST00000513289
Transcript ID Bladder Brain Breast
ENST00000513289 3.686±0.00 4.771±0.00 0.084±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MJ CIL_0006MJ_0002 CGP 5:24487100-27121150
CIL_0006MJ CIL_0006MJ_0003 CGP 5:26880600-31329146

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026432 Cdh9-001 protein_coding Mus_musculus 0 399

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