C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000513434 RP11-357G3.1-001 ENSG00000248843 9606 - 4:3323977-3324762 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonENST00000513434
Transcript ID Bladder Colon
ENST00000513434 0.483±0.00 0.110±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003Z3 CIL_0003Z3_0001 CGP 4:3244369-3439913
CIL_0001XB CIL_0001XB_0001 CGP 4:3293028-3449495

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000139800 Gm5353-001 processed_pseudogene Mus_musculus 0 231
ENSMUST00000187766 RP23-223O13.2-001 processed_pseudogene Mus_musculus 2e-39 167
ENSMUST00000118582 Gm14082-001 processed_pseudogene Mus_musculus 8e-33 145
ENSMUST00000119982 Gm15007-001 processed_pseudogene Mus_musculus 6e-29 132

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