C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5353
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000139800 Gm5353-001 ENSMUSG00000087321 10090 - 8:76862256-76863048 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000139800
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000139800 0.050±0.00 0.120±0.05 0.055±0.00 0.091±0.00 0.278±0.14 0.092±0.00 0.048±0.00 0.047±0.03 0.089±0.03 0.083±0.00 0.177±0.13 0.038±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000393397 AC005042.2-001 processed_pseudogene Homo_sapiens 0 492
ENST00000396414 RP11-242C24.2-001 processed_pseudogene Homo_sapiens 0 545
ENST00000401715 RP3-486D24.1-001 processed_pseudogene Homo_sapiens 0 588
ENST00000417100 RP11-483G21.3-001 processed_pseudogene Homo_sapiens 0 259
ENST00000417266 RPL7AP72-001 processed_pseudogene Homo_sapiens 0 244
ENST00000423357 RPL7AP25-001 processed_pseudogene Homo_sapiens 0 464
ENST00000437848 RP11-767N6.2-001 processed_pseudogene Homo_sapiens 0 625
ENST00000441433 RPL7AP38-001 processed_pseudogene Homo_sapiens 0 496
ENST00000452821 RP11-170M17.2-001 processed_pseudogene Homo_sapiens 0 667
ENST00000469026 RPL7AP60-001 processed_pseudogene Homo_sapiens 0 664
ENST00000470544 RPL7AP31-001 processed_pseudogene Homo_sapiens 0 617
ENST00000473054 RP11-204K16.1-001 processed_pseudogene Homo_sapiens 0 521
ENST00000473913 RP11-463O9.1-001 processed_pseudogene Homo_sapiens 0 603
ENST00000476420 RPL7AP56-001 processed_pseudogene Homo_sapiens 0 265
ENST00000477943 RPL7AP6-001 processed_pseudogene Homo_sapiens 0 688
ENST00000480271 RP11-494M8.1-001 processed_pseudogene Homo_sapiens 0 241
ENST00000481963 RPL7AP8-001 processed_pseudogene Homo_sapiens 0 599
ENST00000482859 RPL7AP30-001 processed_pseudogene Homo_sapiens 0 737
ENST00000483820 RPL7AP4-001 processed_pseudogene Homo_sapiens 0 521
ENST00000486157 RP11-342F17.2-001 processed_pseudogene Homo_sapiens 0 558
ENST00000497325 CTD-2270N23.1-001 processed_pseudogene Homo_sapiens 0 638
ENST00000513434 RP11-357G3.1-001 processed_pseudogene Homo_sapiens 0 231
ENST00000525465 RP11-58K22.2-001 processed_pseudogene Homo_sapiens 0 468
ENST00000541658 RPL7AP3-001 processed_pseudogene Homo_sapiens 0 403
ENST00000588490 RPL7AP66-001 processed_pseudogene Homo_sapiens 0 704

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