C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 29199
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000187766 RP23-223O13.2-001 ENSMUSG00000100090 10090 - 18:12498688-12499462 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000187766
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000187766 0.066±0.02 0.018±0.00 0.023±0.00 0.152±0.01 0.102±0.00 0.048±0.00 0.105±0.01 0.060±0.03 0.093±0.04 0.135±0.05 0.011±0.00 0.074±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005AV CIL_0005AV_0002 CGP 18:12252362-12583013
CIL_0005WU CIL_0005WU_0002 CGP 18:12333819-12737050

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000393397 AC005042.2-001 processed_pseudogene Homo_sapiens 0 484
ENST00000417100 RP11-483G21.3-001 processed_pseudogene Homo_sapiens 0 279
ENST00000425027 RP11-55K22.2-001 transcribed_processed_pseudogene Homo_sapiens 0 403
ENST00000437848 RP11-767N6.2-001 processed_pseudogene Homo_sapiens 0 538
ENST00000451120 RPL7AP71-001 processed_pseudogene Homo_sapiens 0 248
ENST00000470544 RPL7AP31-001 processed_pseudogene Homo_sapiens 0 560
ENST00000473054 RP11-204K16.1-001 processed_pseudogene Homo_sapiens 0 503
ENST00000473913 RP11-463O9.1-001 processed_pseudogene Homo_sapiens 0 562
ENST00000477943 RPL7AP6-001 processed_pseudogene Homo_sapiens 0 652
ENST00000480271 RP11-494M8.1-001 processed_pseudogene Homo_sapiens 0 211
ENST00000513434 RP11-357G3.1-001 processed_pseudogene Homo_sapiens 2e-39 167
ENST00000525465 RP11-58K22.2-001 processed_pseudogene Homo_sapiens 0 455
ENST00000574864 RP11-55K22.2-002 processed_transcript Homo_sapiens 0 405

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