C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000513990 CTC-235G5.2-001 ENSG00000251342 9606 + 5:76078666-76079763 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENST00000513990
Transcript ID Ovary Testis
ENST00000513990 0.050±0.00 0.022±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000778 CIL_000778_0002 CGP 5:75674124-76353939

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121773 Gm14680-001 processed_pseudogene Mus_musculus 0 1062
ENSMUST00000112529 Sms-001 protein_coding Mus_musculus 0 1062
ENSMUST00000120712 Gm6292-001 processed_pseudogene Mus_musculus 0 961
ENSMUST00000145477 Sms-005 nonsense_mediated_decay Mus_musculus 0 726
ENSMUST00000127089 Sms-003 retained_intron Mus_musculus 0 619
ENSMUST00000123770 Sms-002 protein_coding Mus_musculus 0 200

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