C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PDZ and LIM domain 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000514142 PDLIM3-004 ENSG00000154553 9606 - 4:185501751-185517717 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonKidneyLungOvaryENST00000514142
Transcript ID Bladder Breast Colon Kidney Lung Ovary
ENST00000514142 0.407±0.00 3.490±0.70 1.049±0.00 0.263±0.12 1.813±0.00 1.909±0.90

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000H0 CIL_0000H0_0003 CGP 4:185500660-185956652

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034053 Pdlim3-201 protein_coding Mus_musculus 0 278
ENSMUST00000077549 Prss43-201 protein_coding Mus_musculus 0.0000000003 73

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