C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: nucleoporin 54kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000514901 NUP54-009 ENSG00000138750 9606 - 4:76144130-76148398 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENST00000514901
Transcript ID Ovary Testis
ENST00000514901 11.559±0.00 20.238±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008VL CIL_0008VL_0001 VISTA 4:76031495-76631676
CIL_00071G CIL_00071G_0001 CGP 4:76114659-76213893

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005643 IEA nuclear pore

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000135112 Nup54-003 protein_coding Mus_musculus 0 542
ENSMUST00000130156 Nup54-005 protein_coding Mus_musculus 0 446

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