C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gamma-aminobutyric acid (GABA) A receptor, alpha 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000515082 GABRA2-004 ENSG00000151834 9606 - 4:46260772-46390404 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartLungMuscleOvaryENST00000515082
Transcript ID Breast Heart Lung Muscle Ovary
ENST00000515082 0.149±0.00 0.048±0.00 0.031±0.00 0.018±0.00 0.018±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002YX CIL_0002YX_0001 CGP 4:46035769-46475230
CIL_0002YU CIL_0002YU_0001 CGP 4:46248427-46909235

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004890 IEA GABA-A receptor activity
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0005886 IEA plasma membrane
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0006821 IEA chloride transport
GO:0007165 IEA signal transduction
GO:0007214 IEA gamma-aminobutyric acid signaling pathway
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030054 IEA cell junction
GO:0034220 IEA ion transmembrane transport
GO:0045202 IEA synapse

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000000572 Gabra2-201 protein_coding Mus_musculus 0 1465

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