C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cell division cycle 42 pseudogene 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000518654 CDC42P5-001 ENSG00000253439 9606 - 5:173085342-173086210 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLiverMuscleOvaryPlacentaTestisENST00000518654
Transcript ID Adipose Adrenal Brain Breast Colon Liver Muscle Ovary Placenta Testis
ENST00000518654 0.132±0.00 0.289±0.00 0.023±0.00 0.073±0.03 0.370±0.35 1.250±0.00 0.019±0.00 0.263±0.16 0.123±0.05 0.154±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000915 CIL_000915_0001 VISTA 5:172905793-173506594
CIL_0008HF CIL_0008HF_0001 VISTA 5:172963494-173565311
CIL_00023T CIL_00023T_0001 CGP 5:172983757-173139284
CIL_00023P CIL_00023P_0001 CGP 5:173056352-173164387

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000051477 Cdc42-001 protein_coding Mus_musculus 0 708
ENSMUST00000030417 Cdc42-002 protein_coding Mus_musculus 0 619
ENSMUST00000117665 Gm12492-001 processed_pseudogene Mus_musculus 0 501

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