C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00023P_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000164463-ENSG00000113734 CGP 9606 5:173056352-173164387
GeneTranscriptPositionBiotype
ENSG00000113734 (BNIP1)
BCL2/adenovirus E1B 19kDa interacting protein 1 		ENST00000231668 (BNIP1-002) 173144442-173164340 protein_coding
ENST00000351486 (BNIP1-001) 173144515-173164387 protein_coding
ENST00000352523 (BNIP1-004) 173144537-173164341 protein_coding
ENST00000393770 (BNIP1-003) 173144546-173164057 protein_coding
ENST00000519459 (BNIP1-005) 173159976-173161877 protein_coding
ENSG00000164463 (CREBRF)
CREB3 regulatory factor 		ENST00000296953 (CREBRF-001) 173056352-173139284 protein_coding
ENST00000517882 (CREBRF-007) 173057344-173060455 processed_transcript
ENST00000520420 (CREBRF-004) 173056368-173091536 protein_coding
ENST00000520464 (CREBRF-005) 173056390-173124581 retained_intron
ENST00000522692 (CREBRF-003) 173056352-173092330 protein_coding
ENST00000523161 (CREBRF-008) 173057394-173086569 protein_coding
ENSG00000253439 (CDC42P5)
cell division cycle 42 pseudogene 5 		ENST00000518654 (CDC42P5-001) 173085342-173086210 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_00023P_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000048249-ENSMUSG00000024191 CGP 10090 17:26715650-26792565
GeneTranscriptPositionBiotype
ENSMUSG00000024191 (Bnip1)
BCL2/adenovirus E1B interacting protein 1 		ENSMUST00000015725 (Bnip1-001) 26781079-26792521 protein_coding
ENSMUST00000126505 (Bnip1-006) 26781135-26792077 nonsense_mediated_decay
ENSMUST00000128461 (Bnip1-002) 26781082-26785933 retained_intron
ENSMUST00000131362 (Bnip1-004) 26790775-26792565 retained_intron
ENSMUST00000134344 (Bnip1-005) 26781121-26792520 nonsense_mediated_decay
ENSMUST00000135824 (Bnip1-009) 26781093-26792181 protein_coding
ENSMUST00000135899 (Bnip1-003) 26781091-26785934 retained_intron
ENSMUST00000137989 (Bnip1-007) 26781158-26792425 protein_coding
ENSMUST00000147516 (Bnip1-008) 26786356-26790008 retained_intron
ENSMUSG00000048249 (Crebrf)
CREB3 regulatory factor 		ENSMUST00000062519 (Crebrf-001) 26715650-26776635 protein_coding
ENSMUST00000132972 (Crebrf-005) 26742984-26758187 retained_intron
ENSMUST00000142539 (Crebrf-002) 26715710-26764259 protein_coding
ENSMUST00000144221 (Crebrf-003) 26715655-26742959 protein_coding
ENSMUST00000151681 (Crebrf-004) 26715724-26762298 protein_coding
ENSMUST00000176845 (Crebrf-006) 26757702-26759919 retained_intron

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00023P_0001ENSG00000113734ENST00000231668ENST00000351486ENST00000352523ENST00000393770ENST00000519459ENSG00000164463ENST00000296953ENST00000517882ENST00000520420ENST00000520464ENST00000522692ENST00000523161ENSG00000253439ENST00000518654CIL_00023P_0002ENSMUSG00000024191ENSMUST00000015725ENSMUST00000126505ENSMUST00000128461ENSMUST00000131362ENSMUST00000134344ENSMUST00000135824ENSMUST00000135899ENSMUST00000137989ENSMUST00000147516ENSMUSG00000048249ENSMUST00000062519ENSMUST00000132972ENSMUST00000142539ENSMUST00000144221ENSMUST00000151681ENSMUST00000176845
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00023P_0001ENSG00000113734ENST00000231668ENST00000351486ENST00000352523ENST00000393770ENST00000519459ENSG00000164463ENST00000296953ENST00000520420ENST00000520464ENSG00000253439ENST00000518654CIL_00023P_0002ENSMUSG00000024191ENSMUST00000015725ENSMUST00000126505ENSMUST00000128461ENSMUST00000131362ENSMUST00000134344ENSMUST00000135824ENSMUST00000135899ENSMUST00000137989ENSMUSG00000048249ENSMUST00000062519ENSMUST00000132972ENSMUST00000142539ENSMUST00000144221
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000113734 ENST00000231668 0.387±0.00 N/A N/A 0.383±0.00 0.358±0.26 0.312±0.00 0.110±0.00 N/A N/A 0.739±0.00 1.961±0.00 1.094±0.03 0.619±0.00 N/A
ENST00000351486 2.128±0.00 5.812±0.00 0.194±0.00 2.311±0.09 1.496±1.42 1.970±0.38 1.356±0.32 4.316±2.44 2.595±1.91 3.556±1.83 2.041±1.31 3.853±2.29 6.137±3.27 6.530±0.78
ENST00000352523 N/A N/A N/A 0.649±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000393770 1.224±0.00 N/A 0.560±0.00 N/A 0.617±0.00 N/A 1.106±0.00 N/A 0.590±0.00 N/A N/A 1.079±0.00 1.749±0.00 N/A
ENST00000519459 N/A N/A N/A 0.480±0.00 0.129±0.00 0.366±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000164463 ENST00000296953 1.535±0.00 3.644±0.00 2.659±0.00 2.987±0.57 3.142±0.34 3.488±1.00 3.010±1.62 2.685±1.17 3.275±2.24 4.727±1.18 0.605±0.30 2.398±0.97 2.253±0.51 1.764±0.69
ENST00000517882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520420 N/A N/A 5.423±0.00 N/A N/A 2.539±0.00 1.520±0.00 2.465±0.00 N/A 5.312±0.00 0.656±0.00 N/A 1.553±0.00 3.139±0.00
ENST00000520464 N/A N/A N/A N/A N/A 0.705±0.00 N/A 0.404±0.00 N/A N/A N/A N/A N/A N/A
ENST00000522692 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000253439 ENST00000518654 0.132±0.00 0.289±0.00 N/A 0.023±0.00 0.073±0.03 0.370±0.35 N/A N/A 1.250±0.00 N/A 0.019±0.00 0.263±0.16 0.123±0.05 0.154±0.07
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024191 ENSMUST00000015725 4.350±0.62 2.779±0.22 9.852±1.10 12.429±0.52 3.306±1.81 2.645±0.81 4.381±0.52 3.728±0.53 7.466±4.08 2.188±0.75 11.666±1.49 5.370±3.60 8.976±2.20 6.630±0.95
ENSMUST00000126505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.111±1.18 N/A 11.890±0.00
ENSMUST00000128461 1.654±0.45 1.087±0.38 1.231±0.06 0.673±0.00 1.181±0.25 1.032±0.25 0.404±0.00 0.674±0.07 0.846±0.18 0.871±0.00 N/A 0.999±0.06 N/A N/A
ENSMUST00000131362 2.847±0.00 3.032±0.00 2.586±0.00 N/A 2.113±0.00 1.991±0.18 N/A 1.461±0.00 1.826±0.21 2.172±0.49 N/A 3.356±0.65 2.729±0.00 N/A
ENSMUST00000134344 N/A N/A N/A N/A 2.105±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135824 N/A N/A N/A 7.135±0.00 N/A N/A N/A N/A N/A N/A N/A 8.092±0.00 N/A 15.927±0.00
ENSMUST00000135899 0.891±0.23 1.034±0.36 0.955±0.00 2.056±0.05 1.416±0.28 1.174±0.36 0.794±0.12 0.574±0.22 0.889±0.16 0.953±0.39 N/A 1.447±0.81 0.612±0.31 0.741±0.07
ENSMUST00000137989 4.885±1.80 3.808±1.55 N/A N/A 4.629±0.92 4.598±0.99 4.004±1.50 4.878±0.69 6.221±1.27 2.814±0.14 3.432±0.00 5.364±1.10 5.280±0.86 6.692±2.49
ENSMUST00000147516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000048249 ENSMUST00000062519 1.776±0.57 1.032±0.44 6.002±0.81 1.912±0.44 1.244±0.52 0.590±0.13 1.549±0.31 4.722±2.43 1.291±0.83 3.115±0.42 1.056±0.39 1.916±1.80 1.740±1.08 4.549±2.21
ENSMUST00000132972 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.642±0.00 N/A 27.772±0.00
ENSMUST00000142539 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.952±0.00
ENSMUST00000144221 N/A N/A N/A N/A N/A 0.971±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151681 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176845 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading