C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00023P_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000164463-ENSG00000113734 CGP 9606 5:173056352-173164387
GeneTranscriptPositionBiotype
ENSG00000113734 (BNIP1)
BCL2/adenovirus E1B 19kDa interacting protein 1
ENST00000231668 (BNIP1-002) 173144442-173164340 protein_coding
ENST00000351486 (BNIP1-001) 173144515-173164387 protein_coding
ENST00000352523 (BNIP1-004) 173144537-173164341 protein_coding
ENST00000393770 (BNIP1-003) 173144546-173164057 protein_coding
ENST00000519459 (BNIP1-005) 173159976-173161877 protein_coding
ENSG00000164463 (CREBRF)
CREB3 regulatory factor
ENST00000296953 (CREBRF-001) 173056352-173139284 protein_coding
ENST00000517882 (CREBRF-007) 173057344-173060455 processed_transcript
ENST00000520420 (CREBRF-004) 173056368-173091536 protein_coding
ENST00000520464 (CREBRF-005) 173056390-173124581 retained_intron
ENST00000522692 (CREBRF-003) 173056352-173092330 protein_coding
ENST00000523161 (CREBRF-008) 173057394-173086569 protein_coding
ENSG00000253439 (CDC42P5)
cell division cycle 42 pseudogene 5
ENST00000518654 (CDC42P5-001) 173085342-173086210 processed_pseudogene
CIL_00023P_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000048249-ENSMUSG00000024191 CGP 10090 17:26715650-26792565
GeneTranscriptPositionBiotype
ENSMUSG00000024191 (Bnip1)
BCL2/adenovirus E1B interacting protein 1
ENSMUST00000015725 (Bnip1-001) 26781079-26792521 protein_coding
ENSMUST00000126505 (Bnip1-006) 26781135-26792077 nonsense_mediated_decay
ENSMUST00000128461 (Bnip1-002) 26781082-26785933 retained_intron
ENSMUST00000131362 (Bnip1-004) 26790775-26792565 retained_intron
ENSMUST00000134344 (Bnip1-005) 26781121-26792520 nonsense_mediated_decay
ENSMUST00000135824 (Bnip1-009) 26781093-26792181 protein_coding
ENSMUST00000135899 (Bnip1-003) 26781091-26785934 retained_intron
ENSMUST00000137989 (Bnip1-007) 26781158-26792425 protein_coding
ENSMUST00000147516 (Bnip1-008) 26786356-26790008 retained_intron
ENSMUSG00000048249 (Crebrf)
CREB3 regulatory factor
ENSMUST00000062519 (Crebrf-001) 26715650-26776635 protein_coding
ENSMUST00000132972 (Crebrf-005) 26742984-26758187 retained_intron
ENSMUST00000142539 (Crebrf-002) 26715710-26764259 protein_coding
ENSMUST00000144221 (Crebrf-003) 26715655-26742959 protein_coding
ENSMUST00000151681 (Crebrf-004) 26715724-26762298 protein_coding
ENSMUST00000176845 (Crebrf-006) 26757702-26759919 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00023P_0001ENSG00000113734ENST00000231668ENST00000351486ENST00000352523ENST00000393770ENST00000519459ENSG00000164463ENST00000296953ENST00000517882ENST00000520420ENST00000520464ENST00000522692ENST00000523161ENSG00000253439ENST00000518654CIL_00023P_0002ENSMUSG00000024191ENSMUST00000015725ENSMUST00000126505ENSMUST00000128461ENSMUST00000131362ENSMUST00000134344ENSMUST00000135824ENSMUST00000135899ENSMUST00000137989ENSMUST00000147516ENSMUSG00000048249ENSMUST00000062519ENSMUST00000132972ENSMUST00000142539ENSMUST00000144221ENSMUST00000151681ENSMUST00000176845
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00023P_0001ENSG00000113734ENST00000231668ENST00000351486ENST00000352523ENST00000393770ENST00000519459ENSG00000164463ENST00000296953ENST00000520420ENST00000520464ENSG00000253439ENST00000518654CIL_00023P_0002ENSMUSG00000024191ENSMUST00000015725ENSMUST00000126505ENSMUST00000128461ENSMUST00000131362ENSMUST00000134344ENSMUST00000135824ENSMUST00000135899ENSMUST00000137989ENSMUSG00000048249ENSMUST00000062519ENSMUST00000132972ENSMUST00000142539ENSMUST00000144221
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000113734 ENST00000231668 0.387±0.00 N/A N/A 0.383±0.00 0.358±0.26 0.312±0.00 0.110±0.00 N/A N/A 0.739±0.00 1.961±0.00 1.094±0.03 0.619±0.00 N/A
ENST00000351486 2.128±0.00 5.812±0.00 0.194±0.00 2.311±0.09 1.496±1.42 1.970±0.38 1.356±0.32 4.316±2.44 2.595±1.91 3.556±1.83 2.041±1.31 3.853±2.29 6.137±3.27 6.530±0.78
ENST00000352523 N/A N/A N/A 0.649±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000393770 1.224±0.00 N/A 0.560±0.00 N/A 0.617±0.00 N/A 1.106±0.00 N/A 0.590±0.00 N/A N/A 1.079±0.00 1.749±0.00 N/A
ENST00000519459 N/A N/A N/A 0.480±0.00 0.129±0.00 0.366±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000164463 ENST00000296953 1.535±0.00 3.644±0.00 2.659±0.00 2.987±0.57 3.142±0.34 3.488±1.00 3.010±1.62 2.685±1.17 3.275±2.24 4.727±1.18 0.605±0.30 2.398±0.97 2.253±0.51 1.764±0.69
ENST00000517882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520420 N/A N/A 5.423±0.00 N/A N/A 2.539±0.00 1.520±0.00 2.465±0.00 N/A 5.312±0.00 0.656±0.00 N/A 1.553±0.00 3.139±0.00
ENST00000520464 N/A N/A N/A N/A N/A 0.705±0.00 N/A 0.404±0.00 N/A N/A N/A N/A N/A N/A
ENST00000522692 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000253439 ENST00000518654 0.132±0.00 0.289±0.00 N/A 0.023±0.00 0.073±0.03 0.370±0.35 N/A N/A 1.250±0.00 N/A 0.019±0.00 0.263±0.16 0.123±0.05 0.154±0.07
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024191 ENSMUST00000015725 4.350±0.62 2.779±0.22 9.852±1.10 12.429±0.52 3.306±1.81 2.645±0.81 4.381±0.52 3.728±0.53 7.466±4.08 2.188±0.75 11.666±1.49 5.370±3.60 8.976±2.20 6.630±0.95
ENSMUST00000126505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.111±1.18 N/A 11.890±0.00
ENSMUST00000128461 1.654±0.45 1.087±0.38 1.231±0.06 0.673±0.00 1.181±0.25 1.032±0.25 0.404±0.00 0.674±0.07 0.846±0.18 0.871±0.00 N/A 0.999±0.06 N/A N/A
ENSMUST00000131362 2.847±0.00 3.032±0.00 2.586±0.00 N/A 2.113±0.00 1.991±0.18 N/A 1.461±0.00 1.826±0.21 2.172±0.49 N/A 3.356±0.65 2.729±0.00 N/A
ENSMUST00000134344 N/A N/A N/A N/A 2.105±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135824 N/A N/A N/A 7.135±0.00 N/A N/A N/A N/A N/A N/A N/A 8.092±0.00 N/A 15.927±0.00
ENSMUST00000135899 0.891±0.23 1.034±0.36 0.955±0.00 2.056±0.05 1.416±0.28 1.174±0.36 0.794±0.12 0.574±0.22 0.889±0.16 0.953±0.39 N/A 1.447±0.81 0.612±0.31 0.741±0.07
ENSMUST00000137989 4.885±1.80 3.808±1.55 N/A N/A 4.629±0.92 4.598±0.99 4.004±1.50 4.878±0.69 6.221±1.27 2.814±0.14 3.432±0.00 5.364±1.10 5.280±0.86 6.692±2.49
ENSMUST00000147516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000048249 ENSMUST00000062519 1.776±0.57 1.032±0.44 6.002±0.81 1.912±0.44 1.244±0.52 0.590±0.13 1.549±0.31 4.722±2.43 1.291±0.83 3.115±0.42 1.056±0.39 1.916±1.80 1.740±1.08 4.549±2.21
ENSMUST00000132972 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.642±0.00 N/A 27.772±0.00
ENSMUST00000142539 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.952±0.00
ENSMUST00000144221 N/A N/A N/A N/A N/A 0.971±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151681 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176845 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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