C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: FAT atypical cadherin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000520200 FAT2-002 ENSG00000086570 9606 - 5:151504093-151531972 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartKidneyLiverLungOvaryPlacentaTestisENST00000520200
Transcript ID Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000520200 2.172±0.00 0.017±0.00 0.150±0.11 0.016±0.00 0.145±0.00 0.355±0.00 0.879±0.30 1.205±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001UB CIL_0001UB_0001 CGP 5:151437046-151568944
CIL_00025X CIL_00025X_0001 CGP 5:151504093-151687165

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108864 Fat2-201 protein_coding Mus_musculus 0 1005
ENSMUST00000068853 Fat2-001 protein_coding Mus_musculus 0 1005

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