C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bone morphogenetic protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022693 Bmp1-201 ENSMUSG00000022098 10090 - 14:70474557-70520260 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022693
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022693 25.822±7.35 15.713±5.60 20.931±4.52 11.835±7.48 18.754±2.90 9.055±1.75 7.332±0.32 4.856±0.91 18.618±9.27 22.356±0.74 2.493±0.56 42.044±14.13 21.285±8.15 1.163±0.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000812 CIL_000812_0002 VISTA 14:70334498-70935318
CIL_0008ZI CIL_0008ZI_0002 VISTA 14:70339990-70941193
CIL_000810 CIL_000810_0002 VISTA 14:70383794-70984839

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001503 IEA ossification
GO:0004222 IDA metalloendopeptidase activity
GO:0005125 IEA cytokine activity
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IEA extracellular space
GO:0005794 IEA Golgi apparatus
GO:0008083 IEA growth factor activity
GO:0008233 ISO peptidase activity
GO:0008270 IEA zinc ion binding
GO:0030154 IEA cell differentiation
GO:0031988 IEA membrane-bounded vesicle
GO:0051216 IEA cartilage development
GO:0061036 ISO positive regulation of cartilage development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000054472 tll1-001 protein_coding Danio_rerio 0 1018
ENST00000306349 BMP1-010 protein_coding Homo_sapiens 0 2632
ENST00000306385 BMP1-001 protein_coding Homo_sapiens 0 3746
ENST00000354870 BMP1-201 protein_coding Homo_sapiens 0 2974
ENST00000397814 BMP1-202 protein_coding Homo_sapiens 0 547
ENST00000471755 BMP1-003 nonsense_mediated_decay Homo_sapiens 0 2152
ENST00000483364 BMP1-002 nonsense_mediated_decay Homo_sapiens 0 1860
ENST00000517324 BMP1-016 retained_intron Homo_sapiens 0 647
ENST00000518656 BMP1-004 nonsense_mediated_decay Homo_sapiens 0 547
ENST00000518913 BMP1-015 nonsense_mediated_decay Homo_sapiens 0 2089
ENST00000520626 BMP1-006 nonsense_mediated_decay Homo_sapiens 0 2089
ENST00000520970 BMP1-009 nonsense_mediated_decay Homo_sapiens 0 2632
ENST00000520982 BMP1-005 nonsense_mediated_decay Homo_sapiens 0 3164
ENST00000521385 BMP1-007 nonsense_mediated_decay Homo_sapiens 0 2628
ENST00000521521 BMP1-012 processed_transcript Homo_sapiens 0 315
ENST00000523849 BMP1-013 processed_transcript Homo_sapiens 0 381

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