C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 130
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000521389 RNF130-001 ENSG00000113269 9606 - 5:179955067-180072118 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartKidneyLiverLungOvaryENST00000521389
Transcript ID Breast Heart Kidney Liver Lung Ovary
ENST00000521389 2.303±0.00 1.742±0.00 5.704±0.00 2.555±0.00 7.119±0.00 5.173±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006915 IEA apoptotic process
GO:0008270 IEA zinc ion binding
GO:0012501 ISS programmed cell death
GO:0016021 IEA integral component of membrane
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102776 Rnf130-001 protein_coding Mus_musculus 0 2172
ENSMUST00000054684 Rnf130-002 protein_coding Mus_musculus 0 1703
ENSMUST00000143607 Rnf130-003 processed_transcript Mus_musculus 0 392

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