C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: CCR4-NOT transcription complex, subunit 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000521729 CNOT8-009 ENSG00000155508 9606 + 5:154858654-154875587 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENST00000521729
Transcript ID Ovary Placenta Testis
ENST00000521729 5.874±0.00 10.505±0.00 18.949±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088D CIL_00088D_0001 VISTA 5:154298500-154906275
CIL_00023V CIL_00023V_0001 CGP 5:154857553-154938209

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0006351 IEA transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108843 Cnot8-003 protein_coding Mus_musculus 0 739
ENSMUST00000020822 Cnot8-001 protein_coding Mus_musculus 0 739
ENSMUST00000133923 Cnot8-004 processed_transcript Mus_musculus 0 239

Loading