C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000522411 LSS-010 ENSG00000160285 9606 - 21:46190783-46228781 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartMuscleOvaryPlacentaENST00000522411
Transcript ID Colon Heart Muscle Ovary Placenta
ENST00000522411 1.304±0.00 1.428±0.00 0.669±0.00 2.684±0.00 5.810±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000250 IEA lanosterol synthase activity
GO:0003824 IEA catalytic activity
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005811 IDA lipid particle
GO:0006695 IMP cholesterol biosynthetic process
GO:0008202 TAS steroid metabolic process
GO:0016020 IDA membrane
GO:0016866 IEA intramolecular transferase activity
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048678 Lss-001 protein_coding Mus_musculus 0 1703
ENSMUST00000160671 Lss-002 retained_intron Mus_musculus 0 1567
ENSMUST00000162475 Lss-003 retained_intron Mus_musculus 0 848
ENSMUST00000162282 Lss-008 retained_intron Mus_musculus 4.2039e-45 187
ENSMUST00000162848 Lss-004 retained_intron Mus_musculus 4.2039e-45 187

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