C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: transcription elongation factor A (SII), 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000522635 TCEA1-003 ENSG00000187735 9606 - 8:53967170-54022269 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TN CIL_0008TN_0001 VISTA 8:53576629-54178623

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003746 IEA translation elongation factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006414 IEA translational elongation
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000165720 Tcea1-002 protein_coding Mus_musculus 0 510
ENSMUST00000081551 Tcea1-001 protein_coding Mus_musculus 0 510
ENSMUST00000117942 Tcea1-ps1-001 processed_pseudogene Mus_musculus 0 366
ENSMUST00000117772 Gm12112-001 processed_pseudogene Mus_musculus 0 364
ENSMUST00000120989 Gm15223-001 processed_pseudogene Mus_musculus 0.00000000002 75

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