C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: general transcription factor IIH, polypeptide 2, 44kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000523003 GTF2H2-010 ENSG00000145736 9606 - 5:71055030-71067689 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000523003
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000523003 0.167±0.00 0.167±0.00 0.292±0.02 0.346±0.00 0.319±0.00 0.277±0.00 0.832±0.00 0.251±0.04 0.195±0.00 0.371±0.26 0.327±0.14 0.630±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004ZF CIL_0004ZF_0001 CGP 5:70968483-71067689

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000066940 Gtf2h2-006 protein_coding Mus_musculus 0 669
ENSMUST00000066984 Gtf2h2-001 protein_coding Mus_musculus 0 669
ENSMUST00000145266 Gtf2h2-003 nonsense_mediated_decay Mus_musculus 0 669
ENSMUST00000134842 Gtf2h2-002 nonsense_mediated_decay Mus_musculus 0 523
ENSMUST00000142182 Gtf2h2-004 retained_intron Mus_musculus 0 433
ENSMUST00000152049 Gtf2h2-007 processed_transcript Mus_musculus 0 361
ENSMUST00000147229 Gtf2h2-005 retained_intron Mus_musculus 0 361

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