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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | nucleophosmin (nucleolar phosphoprotein B23, numatrin) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000523339  |
NPM1-006 |
ENSG00000181163 |
9606 | + |
5:171387852-171390163  |
retained_intron |
|
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00088M | CIL_00088M_0001 | VISTA | 5:170856489-171457417 |
| CIL_00097F | CIL_00097F_0001 | VISTA | 5:170900986-171503014 |
| CIL_00092S | CIL_00092S_0001 | VISTA | 5:171022159-171623481 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000109354
|
Npm1-002 | protein_coding | Mus_musculus | 0 | 233 |
|
ENSMUST00000075641
|
Npm1-001 | protein_coding | Mus_musculus | 0 | 233 |
|
ENSMUST00000101375
|
Npm1-003 | protein_coding | Mus_musculus | 0 | 231 |
|
ENSMUST00000093201
|
Npm1-006 | protein_coding | Mus_musculus | 0 | 230 |
|
ENSMUST00000118871
|
Gm15484-001 | processed_pseudogene | Mus_musculus | 3.00018e-42 | 174 |
|
ENSMUST00000121029
|
Gm14776-001 | processed_pseudogene | Mus_musculus | 7e-39 | 163 |
