C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: corepressor interacting with RBPJ, 1 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000524055 CIR1P1-001 ENSG00000253146 9606 - 5:154559308-154560440 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENST00000524055
Transcript ID Ovary Testis
ENST00000524055 0.151±0.00 0.008±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099I CIL_00099I_0001 VISTA 5:154192067-154792416
CIL_00088D CIL_00088D_0001 VISTA 5:154298500-154906275
CIL_00023W CIL_00023W_0001 CGP 5:154474972-154817607

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058615 Cir1-001 protein_coding Mus_musculus 0 813
ENSMUST00000117547 Gm13803-001 processed_pseudogene Mus_musculus 0 542
ENSMUST00000118681 Gm2810-001 processed_pseudogene Mus_musculus 0 459

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