C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 2810
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118681 Gm2810-001 ENSMUSG00000082938 10090 + 5:40328438-40329427 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000118681
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000118681 0.183±0.05 0.175±0.13 0.176±0.09 0.436±0.48 0.342±0.35 0.289±0.13 0.088±0.02 0.291±0.12 0.565±0.70 0.162±0.05 0.038±0.01 0.446±0.26 0.033±0.02 1.189±0.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001XJ CIL_0001XJ_0002 CGP 5:39613935-41708155

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000342016 CIR1-001 protein_coding Homo_sapiens 0 641
ENST00000377973 CIR1-007 protein_coding Homo_sapiens 0 198
ENST00000461454 CIR1-005 retained_intron Homo_sapiens 0 198
ENST00000464393 CIR1-006 retained_intron Homo_sapiens 0 313
ENST00000524055 CIR1P1-001 processed_pseudogene Homo_sapiens 0 459

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