C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: farnesyl-diphosphate farnesyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000525954 FDFT1-010 ENSG00000079459 9606 + 8:11808417-11838967 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000525954
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000525954 12.668±0.00 0.966±0.00 10.939±4.36 35.060±0.00 13.506±0.61 5.408±3.63 5.202±0.00 3.306±0.00 4.773±0.00 23.314±5.96 6.802±1.48 15.433±7.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Y4 CIL_0008Y4_0001 VISTA 8:11271783-11873892
CIL_000919 CIL_000919_0001 VISTA 8:11446673-12047186
CIL_0007PQ CIL_0007PQ_0001 VISTA 8:11649159-12249913

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000054963 Fdft1-201 protein_coding Mus_musculus 0 1206
ENSMUST00000038304 Gm6781-201 processed_pseudogene Mus_musculus 0 926

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