C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIC8 guanine nucleotide exchange factor A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000526104 RIC8A-002 ENSG00000177963 9606 + 11:207511-215113 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonLiverLungMuscleOvaryPlacentaTestisENST00000526104
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Liver Lung Muscle Ovary Placenta Testis
ENST00000526104 15.298±0.00 11.921±0.00 1.741±0.00 5.955±3.44 8.309±0.00 2.606±1.19 3.659±0.00 3.418±1.82 2.338±0.00 6.837±4.52 11.699±0.16 13.206±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006LA CIL_0006LA_0001 CGP 11:207511-236931

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005085 IEA guanyl-nucleotide exchange factor activity
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0005737 ISS cytoplasm
GO:0005886 ISS plasma membrane
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026558 Ric8-001 protein_coding Mus_musculus 0 1700
ENSMUST00000123925 Ric8-002 retained_intron Mus_musculus 0 1570
ENSMUST00000147815 Ric8-007 processed_transcript Mus_musculus 0 571
ENSMUST00000152212 Ric8-008 retained_intron Mus_musculus 0 549
ENSMUST00000153498 Ric8-005 processed_transcript Mus_musculus 0 549
ENSMUST00000139956 Ric8-006 processed_transcript Mus_musculus 0 540
ENSMUST00000131850 Ric8-003 retained_intron Mus_musculus 0 209

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