C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: glycosylphosphatidylinositol anchor attachment 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000527653 GPAA1-007 ENSG00000197858 9606 + 8:144084128-144085095 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SS CIL_0007SS_0001 VISTA 8:143880613-144482307
CIL_00026Y CIL_00026Y_0001 CGP 8:144078626-144086216
CIL_00026V CIL_00026V_0001 CGP 8:144082590-144097525

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000164680 Gpaa1-005 retained_intron Mus_musculus 0 641
ENSMUST00000171005 Gpaa1-007 retained_intron Mus_musculus 0 420
ENSMUST00000172281 Gpaa1-002 protein_coding Mus_musculus 0 416
ENSMUST00000164972 Gpaa1-003 nonsense_mediated_decay Mus_musculus 0 416
ENSMUST00000023221 Gpaa1-001 protein_coding Mus_musculus 0 416

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