C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: GPI anchor attachment protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164680 Gpaa1-005 ENSMUSG00000022561 10090 + 15:76332223-76333617 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENSMUST00000164680
Transcript ID Ovary
ENSMUST00000164680 3.516±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SS CIL_0007SS_0002 VISTA 15:76102685-76704351
CIL_00026Y CIL_00026Y_0002 CGP 15:76327397-76334907
CIL_00026V CIL_00026V_0002 CGP 15:76331231-76345934

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355091 GPAA1-001 protein_coding Homo_sapiens 0 562
ENST00000361036 GPAA1-002 protein_coding Homo_sapiens 0 562
ENST00000524418 GPAA1-016 protein_coding Homo_sapiens 0 303
ENST00000525087 GPAA1-014 protein_coding Homo_sapiens 0 403
ENST00000525308 GPAA1-009 retained_intron Homo_sapiens 0 484
ENST00000526233 GPAA1-019 processed_transcript Homo_sapiens 0 392
ENST00000527144 GPAA1-018 processed_transcript Homo_sapiens 0 335
ENST00000527653 GPAA1-007 retained_intron Homo_sapiens 0 641
ENST00000528073 GPAA1-017 nonsense_mediated_decay Homo_sapiens 0 488
ENST00000529503 GPAA1-012 nonsense_mediated_decay Homo_sapiens 0 494
ENST00000529638 GPAA1-006 retained_intron Homo_sapiens 0 416
ENST00000530258 GPAA1-008 protein_coding Homo_sapiens 1e-19 100
ENST00000530633 GPAA1-015 nonsense_mediated_decay Homo_sapiens 0 494
ENST00000531593 GPAA1-010 retained_intron Homo_sapiens 6.99949e-42 174

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