C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIC8 guanine nucleotide exchange factor A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000527696 RIC8A-003 ENSG00000177963 9606 + 11:209069-215113 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartLiverOvaryENST00000527696
Transcript ID Bladder Brain Colon Heart Liver Ovary
ENST00000527696 2.791±0.00 2.457±0.00 2.483±0.00 0.229±0.00 1.059±0.00 8.463±3.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006LA CIL_0006LA_0001 CGP 11:207511-236931

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005085 IEA guanyl-nucleotide exchange factor activity
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0005737 ISS cytoplasm
GO:0005886 ISS plasma membrane
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000123925 Ric8-002 retained_intron Mus_musculus 0 1672
ENSMUST00000026558 Ric8-001 protein_coding Mus_musculus 0 1570
ENSMUST00000147815 Ric8-007 processed_transcript Mus_musculus 0 571
ENSMUST00000152212 Ric8-008 retained_intron Mus_musculus 0 549
ENSMUST00000153498 Ric8-005 processed_transcript Mus_musculus 0 494
ENSMUST00000139956 Ric8-006 processed_transcript Mus_musculus 0 488
ENSMUST00000131850 Ric8-003 retained_intron Mus_musculus 0 209

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