C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ankyrin repeat domain 39
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000001172 Ankrd39-201 ENSMUSG00000079610 10090 - 1:36538173-36547201 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000001172
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000001172 6.381±1.74 9.127±2.12 4.379±0.95 4.015±2.21 7.034±3.12 6.199±0.88 2.556±0.49 5.419±1.02 2.152±0.56 5.009±1.59 2.902±0.94 10.950±3.40 3.272±0.92 3.145±1.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002UC CIL_0002UC_0002 CGP 1:36530534-36547201
CIL_0002UD CIL_0002UD_0002 CGP 1:36538173-36558381

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000393537 ANKRD39-001 protein_coding Homo_sapiens 0 725
ENST00000443120 ANKRD39-002 nonsense_mediated_decay Homo_sapiens 0 654
ENST00000462692 ANKRD23-007 processed_transcript Homo_sapiens 0.00000000004 73
ENST00000528288 C11orf54-001 protein_coding Homo_sapiens 0.0003 53

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