C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 28635
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000189772 CTNND1-001 ENSMUSG00000101645 10090 - 2:84601439-84678041 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000189772
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000189772 11.702±0.00 31.758±0.00 45.484±0.88 5.380±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001738 IMP morphogenesis of a polarized epithelium
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 ISS cytoplasm
GO:0005886 IMP plasma membrane
GO:0005913 IDA cell-cell adherens junction
GO:0005923 IDA tight junction
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007155 IMP cell adhesion
GO:0007435 IMP salivary gland morphogenesis
GO:0016020 IDA membrane
GO:0016055 IEA Wnt signaling pathway
GO:0016337 IMP single organismal cell-cell adhesion
GO:0019903 IPI protein phosphatase binding
GO:0019904 IPI protein domain specific binding
GO:0030027 IDA lamellipodium
GO:0030216 IMP keratinocyte differentiation
GO:0030496 ISS midbody
GO:0045296 IEA cadherin binding
GO:0060690 IMP epithelial cell differentiation involved in salivary gland development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000278422 TMX2-002 protein_coding Homo_sapiens 0 289
ENST00000358694 CTNND1-011 protein_coding Homo_sapiens 0 4591
ENST00000361332 CTNND1-008 protein_coding Homo_sapiens 0 3858
ENST00000361391 CTNND1-007 protein_coding Homo_sapiens 0 3648
ENST00000361796 CTNND1-201 protein_coding Homo_sapiens 0 4702
ENST00000378312 TMX2-001 protein_coding Homo_sapiens 0 289
ENST00000399039 CTNND1-202 protein_coding Homo_sapiens 0 4682
ENST00000399050 CTNND1-006 protein_coding Homo_sapiens 0 3969
ENST00000415361 CTNND1-027 protein_coding Homo_sapiens 0 3435
ENST00000426142 CTNND1-005 protein_coding Homo_sapiens 0 4056
ENST00000428599 CTNND1-017 protein_coding Homo_sapiens 0 4470
ENST00000436507 TMX2P1-001 processed_pseudogene Homo_sapiens 1e-20 104
ENST00000524579 CTNND1-033 protein_coding Homo_sapiens 0 254
ENST00000524630 CTNND1-002 protein_coding Homo_sapiens 0 4591
ENST00000524972 TMX2-005 nonsense_mediated_decay Homo_sapiens 0 289
ENST00000525035 TMX2-008 nonsense_mediated_decay Homo_sapiens 0 289
ENST00000525902 CTNND1-023 protein_coding Homo_sapiens 0 3173
ENST00000526357 CTNND1-025 protein_coding Homo_sapiens 0 3603
ENST00000526772 CTNND1-021 protein_coding Homo_sapiens 0 3062
ENST00000526938 CTNND1-030 protein_coding Homo_sapiens 0 3639
ENST00000527467 CTNND1-018 protein_coding Homo_sapiens 0 2440
ENST00000527599 CTNND1-036 retained_intron Homo_sapiens 0 540
ENST00000528042 TMX2-004 retained_intron Homo_sapiens 0 279
ENST00000528110 TMX2-009 nonsense_mediated_decay Homo_sapiens 0 289
ENST00000528232 CTNND1-019 protein_coding Homo_sapiens 0 4169
ENST00000528395 TMX2-CTNND1-001 nonsense_mediated_decay Homo_sapiens 0 701
ENST00000528621 CTNND1-015 protein_coding Homo_sapiens 0 4337
ENST00000529403 TMX2-003 nonsense_mediated_decay Homo_sapiens 0 289
ENST00000529526 CTNND1-003 protein_coding Homo_sapiens 0 4335
ENST00000529873 CTNND1-022 protein_coding Homo_sapiens 0 3395
ENST00000529919 CTNND1-001 protein_coding Homo_sapiens 0 4682
ENST00000529986 CTNND1-010 protein_coding Homo_sapiens 0 4058
ENST00000530068 CTNND1-031 protein_coding Homo_sapiens 0 717
ENST00000530094 CTNND1-026 protein_coding Homo_sapiens 0 3325
ENST00000530114 TMX2-007 nonsense_mediated_decay Homo_sapiens 0 289
ENST00000530720 CTNND1-035 retained_intron Homo_sapiens 0 278
ENST00000530748 CTNND1-016 protein_coding Homo_sapiens 0 4447
ENST00000531007 CTNND1-038 protein_coding Homo_sapiens 0 446
ENST00000531014 CTNND1-020 protein_coding Homo_sapiens 0 2329
ENST00000531074 RP11-691N7.6-001 nonsense_mediated_decay Homo_sapiens 0 412
ENST00000532245 CTNND1-028 protein_coding Homo_sapiens 0 3936
ENST00000532463 CTNND1-009 protein_coding Homo_sapiens 0 4054
ENST00000532649 CTNND1-014 protein_coding Homo_sapiens 0 4335
ENST00000532787 CTNND1-012 protein_coding Homo_sapiens 0 3116
ENST00000532844 CTNND1-024 protein_coding Homo_sapiens 0 3714
ENST00000533189 CTNND1-034 protein_coding Homo_sapiens 0 532
ENST00000533602 TMX2-006 nonsense_mediated_decay Homo_sapiens 0 289
ENST00000533667 CTNND1-013 protein_coding Homo_sapiens 0 2121
ENST00000534579 CTNND1-029 protein_coding Homo_sapiens 0 4340
ENST00000534647 CTNND1-032 protein_coding Homo_sapiens 0 957

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