C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein kinase C and casein kinase substrate in neurons 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000528462 PACSIN3-003 ENSG00000165912 9606 - 11:47177989-47185881 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartOvaryENST00000528462
Transcript ID Bladder Breast Colon Heart Ovary
ENST00000528462 0.370±0.00 0.814±0.00 0.908±0.00 2.978±0.00 0.318±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005737 ISS cytoplasm
GO:0005886 IEA plasma membrane
GO:0006897 IEA endocytosis
GO:0008092 ISS cytoskeletal protein binding
GO:0008289 IDA lipid binding
GO:0019855 ISS calcium channel inhibitor activity
GO:0045806 ISS negative regulation of endocytosis
GO:0051044 IMP positive regulation of membrane protein ectodomain proteolysis
GO:0051926 ISS negative regulation of calcium ion transport
GO:0070062 IDA extracellular vesicular exosome
GO:0097320 IEA:IDA membrane tubulation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111349 Pacsin3-001 protein_coding Mus_musculus 0 1548
ENSMUST00000168916 Pacsin3-201 protein_coding Mus_musculus 0 1487
ENSMUST00000028694 Pacsin3-004 protein_coding Mus_musculus 0 1487
ENSMUST00000059566 Pacsin3-002 protein_coding Mus_musculus 0 1441
ENSMUST00000138470 Pacsin3-014 protein_coding Mus_musculus 0 723
ENSMUST00000134699 Pacsin3-008 protein_coding Mus_musculus 0 688
ENSMUST00000131711 Pacsin3-006 protein_coding Mus_musculus 0 551
ENSMUST00000156919 Pacsin3-005 protein_coding Mus_musculus 0 455
ENSMUST00000128684 Pacsin3-012 protein_coding Mus_musculus 0 407
ENSMUST00000144394 Pacsin3-003 protein_coding Mus_musculus 0 398
ENSMUST00000154959 Pacsin3-013 protein_coding Mus_musculus 0 329
ENSMUST00000141313 Pacsin3-011 retained_intron Mus_musculus 0 327
ENSDART00000092415 pacsin2-201 protein_coding Danio_rerio 2e-16 92
ENSDART00000149636 pacsin2-003 protein_coding Danio_rerio 2e-16 92
ENSDART00000148728 pacsin2-001 protein_coding Danio_rerio 2e-16 92

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