C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein kinase C and casein kinase substrate in neurons 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028694 Pacsin3-004 ENSMUSG00000027257 10090 + 2:91256813-91264678 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028694
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028694 7.647±0.67 17.666±1.03 11.273±0.36 6.428±3.65 10.596±5.02 3.809±0.85 31.232±5.29 7.602±1.11 10.066±3.25 11.163±3.64 91.343±14.15 14.367±3.51 9.071±4.18 1.055±0.13

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005886 IEA plasma membrane
GO:0006897 IEA endocytosis
GO:0008092 IDA cytoskeletal protein binding
GO:0008289 IDA lipid binding
GO:0019855 IMP calcium channel inhibitor activity
GO:0045806 IDA negative regulation of endocytosis
GO:0051926 IMP negative regulation of calcium ion transport
GO:0097320 IEA:IDA membrane tubulation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000298838 PACSIN3-002 protein_coding Homo_sapiens 0 1637
ENST00000524509 PACSIN3-004 protein_coding Homo_sapiens 0 342
ENST00000525725 PACSIN3-005 protein_coding Homo_sapiens 0 573
ENST00000528462 PACSIN3-003 protein_coding Homo_sapiens 0 1487
ENST00000530405 PACSIN3-006 protein_coding Homo_sapiens 0 342
ENST00000531226 PACSIN3-009 protein_coding Homo_sapiens 0 558
ENST00000532457 PACSIN3-001 nonsense_mediated_decay Homo_sapiens 0 1648
ENST00000533686 PACSIN3-010 protein_coding Homo_sapiens 0 267
ENST00000539589 PACSIN3-201 protein_coding Homo_sapiens 0 1604

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