C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: cell cycle associated protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000529307 CAPRIN1-002 ENSG00000135387 9606 + 11:34052981-34099514 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyPlacentaTestisENST00000529307
Transcript ID Kidney Placenta Testis
ENST00000529307 4.949±0.00 29.324±0.00 114.732±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000929 CIL_000929_0001 VISTA 11:33642739-34246310

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111147 Caprin1-002 protein_coding Mus_musculus 0 2900
ENSMUST00000028607 Caprin1-001 protein_coding Mus_musculus 0 2900
ENSMUST00000143349 Caprin1-016 protein_coding Mus_musculus 0 870
ENSMUST00000143188 Caprin1-008 protein_coding Mus_musculus 0 861
ENSMUST00000141750 Caprin1-007 processed_transcript Mus_musculus 0 795
ENSMUST00000132537 Caprin1-013 retained_intron Mus_musculus 0 649
ENSMUST00000149175 Caprin1-014 retained_intron Mus_musculus 0 608
ENSMUST00000137390 Caprin1-012 retained_intron Mus_musculus 0 351
ENSMUST00000145697 Caprin1-004 processed_transcript Mus_musculus 0 326
ENSMUST00000128477 Caprin1-011 processed_transcript Mus_musculus 0 303
ENSMUST00000145606 Caprin1-015 protein_coding Mus_musculus 0 272
ENSMUST00000145770 Caprin1-005 retained_intron Mus_musculus 0 244
ENSMUST00000155733 Caprin1-006 processed_transcript Mus_musculus 0 239

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