C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: v-rel avian reticuloendotheliosis viral oncogene homolog A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000529389 RELA-025 ENSG00000173039 9606 - 11:65655857-65662960 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLiverLungMuscleOvaryPlacentaTestisENST00000529389
Transcript ID Colon Liver Lung Muscle Ovary Placenta Testis
ENST00000529389 2.725±0.00 2.931±0.00 2.610±0.00 2.723±0.00 27.115±25.41 25.205±0.00 25.850±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W1 CIL_0008W1_0001 VISTA 11:65187233-65790923

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025867 Rela-001 protein_coding Mus_musculus 0 712

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