C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aprataxin and PNKP like factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000529851 APLF-006 ENSG00000169621 9606 + 2:68467572-68579257 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000529851
Transcript ID Adipose Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000529851 0.288±0.00 0.104±0.00 0.453±0.00 0.445±0.00 0.230±0.08 2.049±0.00 0.164±0.00 0.109±0.00 0.296±0.12 0.349±0.05 0.683±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008I2 CIL_0008I2_0001 VISTA 2:67892841-68494859
CIL_0002DS CIL_0002DS_0002 CGP 2:68467561-68655576

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000065997 Aplf-202 protein_coding Mus_musculus 0 459

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