C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PTPRF interacting protein, binding protein 2 (liprin beta 2)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000530181 PPFIBP2-008 ENSG00000166387 9606 + 11:7605738-7653760 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonHeartKidneyLiverOvaryPlacentaTestisENST00000530181
Transcript ID Bladder Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000530181 1.371±0.00 2.247±1.22 0.167±0.00 6.237±0.00 3.985±0.00 6.512±5.25 5.721±3.17 6.430±3.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000D4 CIL_0000D4_0002 CGP 11:7485388-7657127
CIL_0000DI CIL_0000DI_0002 CGP 11:7513298-7677222

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005615 IDA extracellular space
GO:0005622 TAS intracellular
GO:0007160 IEA cell-matrix adhesion
GO:0007165 IEA signal transduction
GO:0008907 IEA integrase activity
GO:0015074 IEA DNA integration
GO:0048786 IEA presynaptic active zone

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040056 Ppfibp2-201 protein_coding Mus_musculus 0 2423
ENSMUST00000098134 Ppfibp2-202 protein_coding Mus_musculus 0 2331

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