C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: D4, zinc and double PHD fingers family 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000530993 DPF2-011 ENSG00000133884 9606 + 11:65333862-65345746 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryENST00000530993
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENST00000530993 45.112±0.00 17.930±0.00 14.368±0.00 17.869±0.00 4.446±0.00 5.295±0.00 13.333±0.00 11.436±0.00 26.120±0.00 14.362±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W1 CIL_0008W1_0001 VISTA 11:65187233-65790923
CIL_0003XD CIL_0003XD_0002 CGP 11:65314818-65353249

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118623 Dpf2-002 protein_coding Mus_musculus 0 782
ENSMUST00000123029 Dpf2-005 retained_intron Mus_musculus 0 582
ENSMUST00000025746 Dpf2-009 nonsense_mediated_decay Mus_musculus 0 582
ENSMUST00000136983 Dpf2-001 protein_coding Mus_musculus 0 582
ENSMUST00000129816 Dpf2-007 retained_intron Mus_musculus 2e-27 126
ENSMUST00000155937 Dpf2-003 processed_transcript Mus_musculus 6e-18 95
ENSMUST00000142995 Dpf2-006 retained_intron Mus_musculus 0.000003 57

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