C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: D4, zinc and double PHD fingers family 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000133884 DPF2 9606 + 11:65333754-65353249 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000252268 DPF2-003 65333867-65352983 protein_coding
  ENST00000415073 DPF2-002 65333855-65353188 protein_coding
  ENST00000444314 DPF2-006 65333852-65342002 retained_intron
  ENST00000524666 DPF2-004 65333873-65352981 retained_intron
  ENST00000528416 DPF2-001 65333754-65353249 protein_coding
  ENST00000530973 DPF2-009 65341487-65346119 retained_intron
  ENST00000530993 DPF2-011 65333862-65345746 processed_transcript
  ENST00000531989 DPF2-010 65345741-65352981 protein_coding
  ENST00000532052 DPF2-005 65344260-65352979 retained_intron
  ENST00000532102 DPF2-007 65333877-65345706 nonsense_mediated_decay
  ENST00000532264 DPF2-012 65333875-65346029 processed_transcript
  ENST00000532492 DPF2-008 65343505-65344095 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000252268ENST00000415073ENST00000444314ENST00000524666ENST00000528416ENST00000530993ENST00000531989ENST00000532264
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000252268 15.487±0.00 13.890±0.00 N/A 9.798±6.72 6.614±5.68 2.776±0.00 13.633±0.00 5.824±4.15 4.373±0.62 12.867±0.00 16.485±0.00 13.456±7.29 10.776±1.34 19.946±3.25
ENST00000415073 N/A N/A N/A N/A N/A N/A N/A N/A 3.632±0.00 N/A N/A N/A N/A N/A
ENST00000444314 N/A N/A N/A 4.868±0.00 4.693±0.00 N/A 1.457±0.00 3.146±0.00 N/A 10.059±0.00 N/A 7.724±0.00 N/A N/A
ENST00000524666 N/A 1.747±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528416 N/A N/A N/A N/A 1.099±0.00 N/A 1.134±0.00 N/A N/A 2.080±0.00 2.758±0.00 17.347±0.00 3.300±0.00 N/A
ENST00000530993 N/A N/A 45.112±0.00 17.930±0.00 14.368±0.00 17.869±0.00 4.446±0.00 5.295±0.00 13.333±0.00 11.436±0.00 26.120±0.00 14.362±0.00 N/A N/A
ENST00000531989 N/A 5.422±0.00 N/A N/A 6.088±0.00 N/A N/A 4.499±0.00 1.976±0.00 5.152±0.00 3.929±0.00 10.275±0.16 6.944±1.19 14.377±0.00
ENST00000532264 N/A N/A 9.492±0.00 N/A N/A 4.855±0.00 N/A N/A 10.983±0.00 10.986±0.43 N/A 9.181±0.24 8.809±1.36 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W1 CIL_0008W1_0001 VISTA 11:65187233-65790923
CIL_0003XD CIL_0003XD_0002 CGP 11:65314818-65353249

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000790 IDA nuclear chromatin
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005813 IDA centrosome
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006915 TAS apoptotic process
GO:0008270 IEA zinc ion binding
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0046872 IEA metal ion binding
GO:0097190 TAS apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012219 dpf2 D4, zinc and double PHD fingers family 2 protein_coding Danio_rerio
ENSDARG00000037291 dpf2l D4, zinc and double PHD fingers family 2, like protein_coding Danio_rerio
ENSMUSG00000024826 Dpf2 D4, zinc and double PHD fingers family 2 protein_coding Mus_musculus

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