C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: protein kinase C and casein kinase substrate in neurons 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000532457 PACSIN3-001 ENSG00000165912 9606 - 11:47177557-47186440 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalOvaryTestisENST00000532457
Transcript ID Adrenal Ovary Testis
ENST00000532457 0.761±0.00 4.225±0.00 1.789±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0097320 IEA membrane tubulation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028694 Pacsin3-004 protein_coding Mus_musculus 0 1648
ENSMUST00000168916 Pacsin3-201 protein_coding Mus_musculus 0 1639
ENSMUST00000111349 Pacsin3-001 protein_coding Mus_musculus 0 1602
ENSMUST00000059566 Pacsin3-002 protein_coding Mus_musculus 0 1554
ENSMUST00000138470 Pacsin3-014 protein_coding Mus_musculus 0 723
ENSMUST00000134699 Pacsin3-008 protein_coding Mus_musculus 0 688
ENSMUST00000131711 Pacsin3-006 protein_coding Mus_musculus 0 490
ENSMUST00000156919 Pacsin3-005 protein_coding Mus_musculus 0 455
ENSMUST00000128684 Pacsin3-012 protein_coding Mus_musculus 0 401
ENSMUST00000144394 Pacsin3-003 protein_coding Mus_musculus 0 398
ENSMUST00000154959 Pacsin3-013 protein_coding Mus_musculus 0 329
ENSMUST00000141313 Pacsin3-011 retained_intron Mus_musculus 0 322
ENSDART00000092415 pacsin2-201 protein_coding Danio_rerio 2e-18 99
ENSDART00000149636 pacsin2-003 protein_coding Danio_rerio 2e-18 99
ENSDART00000148728 pacsin2-001 protein_coding Danio_rerio 2e-18 99

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